RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W YBR016WP38216 128 aa5.18□□□□□ -1.58
UBA4YHR111W YBL008W-AQ3E821 79 aa5.18□□□□□ -1.58
UBA4YHR111W YLR255CO13574 117 aa5.17□□□□□ -1.58
UBA4YHR111W COX8P04039 78 aa5.17□□□□□ -1.58
UBA4YHR111W NOP10Q6Q547 58 aaPredicted RBP5.16□□□□□ -1.58
UBA4YHR111W YFL065CP43539 102 aa5.15□□□□□ -1.59
UBA4YHR111W YPR203WQ08994 102 aa5.15□□□□□ -1.59
UBA4YHR111W YKL065W-AQ2V2P2 73 aa5.13□□□□□ -1.59
UBA4YHR111W YBR121C-AP0C5L4 52 aa5.07□□□□□ -1.6
UBA4YHR111W YIL156W-BQ2V2P4 73 aa5.06□□□□□ -1.6
UBA4YHR111W YHR125WP38831 101 aa5.05□□□□□ -1.6
UBA4YHR111W OLI1P61829 76 aa5.05□□□□□ -1.6
UBA4YHR111W RPS30AP0CX33 63 aaKnown RBP5.03□□□□□ -1.6
UBA4YHR111W RPS30BP0CX34 63 aaKnown RBP5.03□□□□□ -1.6
UBA4YHR111W YOL166W-AQ8TGJ1 51 aa5.02□□□□□ -1.61
UBA4YHR111W YDR246W-AQ3E763 66 aa5□□□□□ -1.61
UBA4YHR111W YML054C-AQ3E809 52 aa4.99□□□□□ -1.61
UBA4YHR111W YDR119W-AQ2V2P9 66 aa4.98□□□□□ -1.61
UBA4YHR111W YPL038W-AQ3E7B4 63 aa4.97□□□□□ -1.61
UBA4YHR111W YFR032C-BQ8TGU2 87 aa4.97□□□□□ -1.61
UBA4YHR111W AIM4P38305 123 aaPredicted RBP4.94□□□□□ -1.62
UBA4YHR111W YDR182W-AQ3E796 67 aa4.93□□□□□ -1.62
UBA4YHR111W YBL044WP38194 122 aa4.92□□□□□ -1.62
UBA4YHR111W RUB1Q03919 77 aa4.92□□□□□ -1.62
UBA4YHR111W MRX7P53869 86 aa4.87□□□□□ -1.63
UBA4YHR111W RPS28BP0C0X0 67 aaKnown RBP4.86□□□□□ -1.63
UBA4YHR111W YBR201C-AQ2V2Q3 67 aa4.86□□□□□ -1.63
UBA4YHR111W RPS28AQ3E7X9 67 aaPredicted RBP4.86□□□□□ -1.63
UBA4YHR111W SDH6Q3E785 79 aa4.84□□□□□ -1.63
UBA4YHR111W OST5Q92316 86 aa4.83□□□□□ -1.64
UBA4YHR111W RPS29BP41058 56 aaKnown RBP4.77□□□□□ -1.65
UBA4YHR111W TOM6P33448 61 aa4.72□□□□□ -1.65
UBA4YHR111W RPS29AP41057 56 aaKnown RBP4.71□□□□□ -1.66
UBA4YHR111W YMR001C-AQ8TGS9 76 aa4.71□□□□□ -1.66
UBA4YHR111W HUB1Q6Q546 73 aa4.67□□□□□ -1.66
UBA4YHR111W RPL37AP49166 88 aaKnown RBP4.63□□□□□ -1.67
UBA4YHR111W YOR394C-AQ8TGJ0 55 aa4.62□□□□□ -1.67
UBA4YHR111W ATP17Q06405 101 aa4.48□□□□□ -1.69
UBA4YHR111W YIR021W-AQ3E739 70 aa4.43□□□□□ -1.7
UBA4YHR111W YMR122CQ03879 124 aa4.37□□□□□ -1.71
UBA4YHR111W YER188C-AP0C0V2 99 aa4.35□□□□□ -1.71
UBA4YHR111W YER078W-AQ3E7A2 54 aa4.33□□□□□ -1.72
UBA4YHR111W YML100W-AQ8TGT0 57 aa4.31□□□□□ -1.72
UBA4YHR111W YNL277W-AQ3E7Z0 62 aa4.29□□□□□ -1.72
UBA4YHR111W YCR108CQ3E819 63 aa4.27□□□□□ -1.73
UBA4YHR111W YAL067W-AQ8TGK6 75 aa4.25□□□□□ -1.73
UBA4YHR111W YOR381W-AQ3E804 55 aa4.24□□□□□ -1.73
UBA4YHR111W YLR412C-AQ3E742 68 aa4.23□□□□□ -1.73
UBA4YHR111W YCR095W-AQ3E787 52 aa4.22□□□□□ -1.73
UBA4YHR111W SBH1P52870 82 aa4.21□□□□□ -1.74
UBA4YHR111W YEL014CP39999 101 aa4.16□□□□□ -1.74
UBA4YHR111W YOR072W-BQ3E832 53 aa4.13□□□□□ -1.75
UBA4YHR111W YHR032W-AP0C5N6 59 aa4.12□□□□□ -1.75
UBA4YHR111W YOR376W-AQ3E805 51 aa3.95□□□□□ -1.78
UBA4YHR111W QCR10P37299 77 aa3.91□□□□□ -1.78
UBA4YHR111W SOM1Q05676 74 aa3.88□□□□□ -1.79
UBA4YHR111W HHY1P39982 102 aa3.8□□□□□ -1.8
UBA4YHR111W YGL014C-AP0C5N1 53 aa3.61□□□□□ -1.83
UBA4YHR111W YBR072C-AQ3E794 53 aa3.57□□□□□ -1.84
UBA4YHR111W YHR050W-AQ05451 56 aa3.45□□□□□ -1.86
UBA4YHR111W YHR086W-AQ3E746 53 aa3.35□□□□□ -1.87
UBA4YHR111W YLR157W-EP0CF00 54 aa2.63□□□□□ -1.99
UBA4YHR111W YOL164W-AQ3E7A5 60 aa2.51□□□□□ -2.01
Retrieved 63 of 5,963 RNA–protein pairs in 5.9 ms