RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W YCR095W-AQ3E787 52 aa2.73□□□□□ -1.97
PRE9YGR135W URA2P07259 2214 aaKnown RBP2.73□□□□□ -1.97
PRE9YGR135W TOR2P32600 2474 aaKnown RBP2.73□□□□□ -1.97
PRE9YGR135W RPL43AP0CX25 92 aaKnown RBP2.7□□□□□ -1.98
PRE9YGR135W RPL43BP0CX26 92 aa2.7□□□□□ -1.98
PRE9YGR135W YBR027CP38220 110 aa2.7□□□□□ -1.98
PRE9YGR135W YDL012CQ12489 107 aa2.7□□□□□ -1.98
PRE9YGR135W YIL156W-BQ2V2P4 73 aa2.69□□□□□ -1.98
PRE9YGR135W ATP17Q06405 101 aa2.67□□□□□ -1.98
PRE9YGR135W YOL097W-AQ3E7Y9 61 aa2.67□□□□□ -1.98
PRE9YGR135W YGL149WP53116 101 aa2.65□□□□□ -1.99
PRE9YGR135W YNL122CP53921 115 aaPredicted RBP2.65□□□□□ -1.99
PRE9YGR135W YJR128WP47162 119 aa2.64□□□□□ -1.99
PRE9YGR135W LCL2Q08045 131 aa2.64□□□□□ -1.99
PRE9YGR135W SPG1P50088 95 aa2.63□□□□□ -1.99
PRE9YGR135W YLR255CO13574 117 aa2.62□□□□□ -1.99
PRE9YGR135W YJL144WP47009 104 aa2.62□□□□□ -1.99
PRE9YGR135W MRX7P53869 86 aa2.61□□□□□ -1.99
PRE9YGR135W YGR146C-AQ8TGT9 53 aa2.61□□□□□ -1.99
PRE9YGR135W TEL1P38110 2787 aa2.61□□□□□ -1.99
PRE9YGR135W YDR034C-AP0C289 58 aa2.6□□□□□ -1.99
PRE9YGR135W YHR073W-AP0C5N7 58 aa2.6□□□□□ -1.99
PRE9YGR135W DDR48P18899 430 aaKnown RBP2.6□□□□□ -1.99
PRE9YGR135W PRP8P33334 2413 aaKnown RBP2.6□□□□□ -1.99
PRE9YGR135W YBR201C-AQ2V2Q3 67 aa2.59□□□□□ -1.99
PRE9YGR135W MEC1P38111 2368 aa2.58□□□□□ -2
PRE9YGR135W COX8P04039 78 aa2.57□□□□□ -2
PRE9YGR135W YOR316C-AQ3E806 69 aa2.57□□□□□ -2
PRE9YGR135W YCL042WP25572 119 aa2.55□□□□□ -2
PRE9YGR135W UTP20P35194 2493 aaKnown RBP2.55□□□□□ -2
PRE9YGR135W QCR10P37299 77 aa2.55□□□□□ -2
PRE9YGR135W YGL014C-AP0C5N1 53 aa2.53□□□□□ -2
PRE9YGR135W RPL37BP51402 88 aaKnown RBP2.53□□□□□ -2
PRE9YGR135W YBR016WP38216 128 aa2.51□□□□□ -2.01
PRE9YGR135W OLI1P61829 76 aa2.51□□□□□ -2.01
PRE9YGR135W NUM1Q00402 2748 aa2.49□□□□□ -2.01
PRE9YGR135W LCL1Q02786 101 aa2.49□□□□□ -2.01
PRE9YGR135W SOM1Q05676 74 aa2.49□□□□□ -2.01
PRE9YGR135W YHR086W-AQ3E746 53 aa2.47□□□□□ -2.01
PRE9YGR135W YEL014CP39999 101 aa2.45□□□□□ -2.02
PRE9YGR135W TOR1P35169 2470 aa2.42□□□□□ -2.02
PRE9YGR135W YCR108CQ3E819 63 aa2.42□□□□□ -2.02
PRE9YGR135W YOR394C-AQ8TGJ0 55 aa2.41□□□□□ -2.02
PRE9YGR135W COX7P10174 60 aa2.4□□□□□ -2.03
PRE9YGR135W CMC4Q3E7A9 73 aa2.4□□□□□ -2.03
PRE9YGR135W CUP1-1P0CX80 61 aa2.39□□□□□ -2.03
PRE9YGR135W CUP1-2P0CX81 61 aa2.39□□□□□ -2.03
PRE9YGR135W YDR210WQ03482 75 aa2.38□□□□□ -2.03
PRE9YGR135W YBL044WP38194 122 aa2.37□□□□□ -2.03
PRE9YGR135W DYN1P36022 4092 aa2.29□□□□□ -2.04
PRE9YGR135W RPL37AP49166 88 aaKnown RBP2.27□□□□□ -2.05
PRE9YGR135W YOR072W-BQ3E832 53 aa2.19□□□□□ -2.06
PRE9YGR135W HHY1P39982 102 aa2.17□□□□□ -2.06
PRE9YGR135W YBR072C-AQ3E794 53 aa2.17□□□□□ -2.06
PRE9YGR135W YJL009WP47078 108 aa2.16□□□□□ -2.06
PRE9YGR135W YML054C-AQ3E809 52 aa2.14□□□□□ -2.07
PRE9YGR135W Q0017Q9ZZX8 53 aa2.13□□□□□ -2.07
PRE9YGR135W MDN1Q12019 4910 aaKnown RBP1.91□□□□□ -2.1
PRE9YGR135W YOL164W-AQ3E7A5 60 aa1.81□□□□□ -2.12
PRE9YGR135W YHR050W-AQ05451 56 aa1.73□□□□□ -2.13
PRE9YGR135W YLR157W-EP0CF00 54 aa1.58□□□□□ -2.16
PRE9YGR135W RPS29AP41057 56 aaKnown RBP1.55□□□□□ -2.16
PRE9YGR135W RPS29BP41058 56 aaKnown RBP1.53□□□□□ -2.16
Retrieved 63 of 5,963 RNA–protein pairs in 24.4 ms