RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W YOR011W-AQ3E807 68 aa1.96□□□□□ -2.1
CAF130YGR134W YLR307C-AQ3E825 87 aa1.96□□□□□ -2.1
CAF130YGR134W YNL042W-BQ3E7Z2 85 aa1.95□□□□□ -2.1
CAF130YGR134W YGR035W-AQ45U48 73 aa1.95□□□□□ -2.1
CAF130YGR134W EDC1P53080 175 aaPredicted RBP1.95□□□□□ -2.1
CAF130YGR134W YBL039W-BP0C268 59 aa1.93□□□□□ -2.1
CAF130YGR134W YNL122CP53921 115 aaPredicted RBP1.93□□□□□ -2.1
CAF130YGR134W YFR009W-AP0C5M9 85 aa1.93□□□□□ -2.1
CAF130YGR134W YKL065W-AQ2V2P2 73 aa1.92□□□□□ -2.1
CAF130YGR134W AUA1P32450 94 aa1.92□□□□□ -2.1
CAF130YGR134W YBR230W-AQ3E762 66 aa1.9□□□□□ -2.1
CAF130YGR134W YJR128WP47162 119 aa1.9□□□□□ -2.11
CAF130YGR134W YOL166W-AQ8TGJ1 51 aa1.9□□□□□ -2.11
CAF130YGR134W RPS30AP0CX33 63 aaKnown RBP1.88□□□□□ -2.11
CAF130YGR134W RPS30BP0CX34 63 aaKnown RBP1.88□□□□□ -2.11
CAF130YGR134W YOR072WQ08486 104 aa1.87□□□□□ -2.11
CAF130YGR134W YJL127C-BQ3E828 52 aa1.87□□□□□ -2.11
CAF130YGR134W YJL009WP47078 108 aa1.87□□□□□ -2.11
CAF130YGR134W YLL066W-BQ8TGJ7 56 aa1.87□□□□□ -2.11
CAF130YGR134W DDR2P89113 61 aa1.86□□□□□ -2.11
CAF130YGR134W YBR056W-AI2HB52 66 aa1.85□□□□□ -2.11
CAF130YGR134W YHR213W-BQ8TGK1 99 aa1.85□□□□□ -2.11
CAF130YGR134W YAR064WP39563 99 aa1.85□□□□□ -2.11
CAF130YGR134W SDH6Q3E785 79 aa1.85□□□□□ -2.11
CAF130YGR134W RPL43AP0CX25 92 aaKnown RBP1.84□□□□□ -2.11
CAF130YGR134W RPL43BP0CX26 92 aa1.84□□□□□ -2.11
CAF130YGR134W YJL133C-AQ3E7A3 74 aa1.84□□□□□ -2.11
CAF130YGR134W CSF1Q12150 2958 aa1.83□□□□□ -2.12
CAF130YGR134W HUB1Q6Q546 73 aa1.82□□□□□ -2.12
CAF130YGR134W MEC1P38111 2368 aa1.82□□□□□ -2.12
CAF130YGR134W MDN1Q12019 4910 aaKnown RBP1.81□□□□□ -2.12
CAF130YGR134W VPS13Q07878 3144 aa1.81□□□□□ -2.12
CAF130YGR134W RPL38P49167 78 aaKnown RBP1.81□□□□□ -2.12
CAF130YGR134W YOL097W-AQ3E7Y9 61 aa1.81□□□□□ -2.12
CAF130YGR134W YHR073W-AP0C5N7 58 aa1.79□□□□□ -2.12
CAF130YGR134W ATP17Q06405 101 aa1.78□□□□□ -2.12
CAF130YGR134W TRA1P38811 3744 aa1.78□□□□□ -2.13
CAF130YGR134W COX7P10174 60 aa1.77□□□□□ -2.13
CAF130YGR134W IRA2P19158 3079 aa1.76□□□□□ -2.13
CAF130YGR134W YLR157W-DP0CE99 70 aa1.75□□□□□ -2.13
CAF130YGR134W YMR001C-AQ8TGS9 76 aa1.75□□□□□ -2.13
CAF130YGR134W YIL102CP40488 101 aa1.73□□□□□ -2.13
CAF130YGR134W YOL164W-AQ3E7A5 60 aa1.73□□□□□ -2.13
CAF130YGR134W DYN1P36022 4092 aa1.73□□□□□ -2.13
CAF130YGR134W IRA1P18963 3092 aa1.73□□□□□ -2.13
CAF130YGR134W YGR146C-AQ8TGT9 53 aa1.72□□□□□ -2.13
CAF130YGR134W YDR034C-AP0C289 58 aa1.69□□□□□ -2.14
CAF130YGR134W YBR072C-AQ3E794 53 aa1.68□□□□□ -2.14
CAF130YGR134W RPL37BP51402 88 aaKnown RBP1.68□□□□□ -2.14
CAF130YGR134W YOR316C-AQ3E806 69 aa1.67□□□□□ -2.14
CAF130YGR134W YLR157W-EP0CF00 54 aa1.66□□□□□ -2.14
CAF130YGR134W YBR016WP38216 128 aa1.65□□□□□ -2.14
CAF130YGR134W OLI1P61829 76 aa1.61□□□□□ -2.15
CAF130YGR134W YOR394C-AQ8TGJ0 55 aa1.58□□□□□ -2.16
CAF130YGR134W RPL37AP49166 88 aaKnown RBP1.57□□□□□ -2.16
CAF130YGR134W YBL044WP38194 122 aa1.54□□□□□ -2.16
CAF130YGR134W Q0017Q9ZZX8 53 aa1.51□□□□□ -2.17
CAF130YGR134W YCR108CQ3E819 63 aa1.5□□□□□ -2.17
CAF130YGR134W YML054C-AQ3E809 52 aa1.48□□□□□ -2.17
CAF130YGR134W YOR072W-BQ3E832 53 aa1.44□□□□□ -2.18
CAF130YGR134W YHR050W-AQ05451 56 aa1.17□□□□□ -2.22
CAF130YGR134W RPS29BP41058 56 aaKnown RBP1.17□□□□□ -2.22
CAF130YGR134W RPS29AP41057 56 aaKnown RBP1.11□□□□□ -2.23
Retrieved 63 of 5,963 RNA–protein pairs in 12 ms