RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C AUA1P32450 94 aa1.9□□□□□ -2.11
XRN1YGL173C YDR119W-AQ2V2P9 66 aa1.9□□□□□ -2.11
XRN1YGL173C COX19Q3E731 98 aa1.9□□□□□ -2.11
XRN1YGL173C YLR255CO13574 117 aa1.89□□□□□ -2.11
XRN1YGL173C OLI1P61829 76 aa1.89□□□□□ -2.11
XRN1YGL173C TOM7P53507 60 aa1.88□□□□□ -2.11
XRN1YGL173C YOL097W-AQ3E7Y9 61 aa1.88□□□□□ -2.11
XRN1YGL173C ERI1P62651 68 aaKnown RBP1.88□□□□□ -2.11
XRN1YGL173C YIL156W-BQ2V2P4 73 aa1.88□□□□□ -2.11
XRN1YGL173C YOR034C-AQ3E735 80 aa1.87□□□□□ -2.11
XRN1YGL173C YMR175W-AQ3E766 64 aa1.87□□□□□ -2.11
XRN1YGL173C YMR122W-AQ3E842 84 aa1.86□□□□□ -2.11
XRN1YGL173C YDR034C-AP0C289 58 aa1.86□□□□□ -2.11
XRN1YGL173C YNL198CP40166 100 aa1.85□□□□□ -2.11
XRN1YGL173C PMP3P87284 55 aa1.85□□□□□ -2.11
XRN1YGL173C MDN1Q12019 4910 aaKnown RBP1.84□□□□□ -2.11
XRN1YGL173C ATP17Q06405 101 aa1.84□□□□□ -2.12
XRN1YGL173C YOL164W-AQ3E7A5 60 aa1.83□□□□□ -2.12
XRN1YGL173C COA2Q3E823 68 aa1.82□□□□□ -2.12
XRN1YGL173C RPS30AP0CX33 63 aaKnown RBP1.79□□□□□ -2.12
XRN1YGL173C RPS30BP0CX34 63 aaKnown RBP1.79□□□□□ -2.12
XRN1YGL173C YLR342W-AQ3E810 57 aa1.78□□□□□ -2.12
XRN1YGL173C YLR157W-DP0CE99 70 aa1.78□□□□□ -2.12
XRN1YGL173C YDR210WQ03482 75 aa1.78□□□□□ -2.12
XRN1YGL173C YBL039W-BP0C268 59 aa1.77□□□□□ -2.13
XRN1YGL173C YDL022C-AP0C5L6 82 aa1.76□□□□□ -2.13
XRN1YGL173C YGR121W-AQ3E816 71 aa1.75□□□□□ -2.13
XRN1YGL173C YLR307C-AQ3E825 87 aa1.75□□□□□ -2.13
XRN1YGL173C YGR025WP53216 100 aa1.74□□□□□ -2.13
XRN1YGL173C YBR200W-AQ3E755 54 aa1.74□□□□□ -2.13
XRN1YGL173C YFR009W-AP0C5M9 85 aa1.73□□□□□ -2.13
XRN1YGL173C YLR157W-EP0CF00 54 aa1.73□□□□□ -2.13
XRN1YGL173C HUA1P40325 198 aa1.72□□□□□ -2.13
XRN1YGL173C YMR001C-AQ8TGS9 76 aa1.72□□□□□ -2.13
XRN1YGL173C YDR182W-AQ3E796 67 aa1.71□□□□□ -2.14
XRN1YGL173C YOR008C-AQ3E7B9 74 aa1.69□□□□□ -2.14
XRN1YGL173C YLL066W-BQ8TGJ7 56 aa1.68□□□□□ -2.14
XRN1YGL173C YBL044WP38194 122 aa1.68□□□□□ -2.14
XRN1YGL173C EDC1P53080 175 aaPredicted RBP1.67□□□□□ -2.14
XRN1YGL173C RPS29AP41057 56 aaKnown RBP1.66□□□□□ -2.14
XRN1YGL173C YKL023C-AQ2V2P3 75 aa1.64□□□□□ -2.15
XRN1YGL173C YOR394C-AQ8TGJ0 55 aa1.64□□□□□ -2.15
XRN1YGL173C DDR2P89113 61 aa1.63□□□□□ -2.15
XRN1YGL173C TOS6P48560 102 aa1.61□□□□□ -2.15
XRN1YGL173C YBR230W-AQ3E762 66 aa1.6□□□□□ -2.15
XRN1YGL173C RPS29BP41058 56 aaKnown RBP1.6□□□□□ -2.15
XRN1YGL173C RPL37AP49166 88 aaKnown RBP1.59□□□□□ -2.16
XRN1YGL173C YLL006W-AQ3E814 58 aa1.57□□□□□ -2.16
XRN1YGL173C YJL127C-BQ3E828 52 aa1.57□□□□□ -2.16
XRN1YGL173C Q0017Q9ZZX8 53 aa1.57□□□□□ -2.16
XRN1YGL173C YML054C-AQ3E809 52 aa1.56□□□□□ -2.16
XRN1YGL173C YDR246W-AQ3E763 66 aa1.54□□□□□ -2.16
XRN1YGL173C RPL29P05747 59 aaPredicted RBP1.53□□□□□ -2.16
XRN1YGL173C YOL166W-AQ8TGJ1 51 aa1.52□□□□□ -2.17
XRN1YGL173C RPL37BP51402 88 aaKnown RBP1.51□□□□□ -2.17
XRN1YGL173C YGR146C-AQ8TGT9 53 aa1.51□□□□□ -2.17
XRN1YGL173C YCR108CQ3E819 63 aa1.46□□□□□ -2.18
XRN1YGL173C YOR072W-BQ3E832 53 aa1.46□□□□□ -2.18
XRN1YGL173C YBR016WP38216 128 aa1.43□□□□□ -2.18
XRN1YGL173C YJL133C-AQ3E7A3 74 aa1.42□□□□□ -2.18
XRN1YGL173C YHR073W-AP0C5N7 58 aa1.37□□□□□ -2.19
XRN1YGL173C YHR050W-AQ05451 56 aa1.35□□□□□ -2.19
XRN1YGL173C YOR316C-AQ3E806 69 aa1.32□□□□□ -2.2
Retrieved 63 of 5,963 RNA–protein pairs in 34 ms