RNA–Protein interactions for RNA: YGL115W

SNF4, Transcript of Activating gamma subunit of the AMP-activated Snf1p kinase complex, yeastyeast

Gene SNF4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF4YGL115W YBR027CP38220 110 aa4.56□□□□□ -1.68
SNF4YGL115W YJR085CP47131 105 aaKnown RBP4.56□□□□□ -1.68
SNF4YGL115W MMS2P53152 137 aa4.56□□□□□ -1.68
SNF4YGL115W NUM1Q00402 2748 aa4.55□□□□□ -1.68
SNF4YGL115W YCR095W-AQ3E787 52 aa4.54□□□□□ -1.68
SNF4YGL115W DYN1P36022 4092 aa4.51□□□□□ -1.69
SNF4YGL115W YFR032C-BQ8TGU2 87 aa4.51□□□□□ -1.69
SNF4YGL115W YHR073W-AP0C5N7 58 aa4.49□□□□□ -1.69
SNF4YGL115W YPR195CQ06594 109 aa4.47□□□□□ -1.69
SNF4YGL115W YLR255CO13574 117 aa4.46□□□□□ -1.7
SNF4YGL115W ATP17Q06405 101 aa4.46□□□□□ -1.7
SNF4YGL115W YJR128WP47162 119 aa4.45□□□□□ -1.7
SNF4YGL115W YGR146C-AQ8TGT9 53 aa4.45□□□□□ -1.7
SNF4YGL115W YML100W-AQ8TGT0 57 aa4.44□□□□□ -1.7
SNF4YGL115W CUP1-1P0CX80 61 aa4.43□□□□□ -1.7
SNF4YGL115W CUP1-2P0CX81 61 aa4.43□□□□□ -1.7
SNF4YGL115W YIL156W-BQ2V2P4 73 aa4.42□□□□□ -1.7
SNF4YGL115W YGL149WP53116 101 aa4.41□□□□□ -1.7
SNF4YGL115W LCL1Q02786 101 aa4.41□□□□□ -1.7
SNF4YGL115W YBL008W-AQ3E821 79 aa4.41□□□□□ -1.7
SNF4YGL115W YNL122CP53921 115 aaPredicted RBP4.4□□□□□ -1.71
SNF4YGL115W LCL2Q08045 131 aa4.4□□□□□ -1.71
SNF4YGL115W COX8P04039 78 aa4.38□□□□□ -1.71
SNF4YGL115W YBR201C-AQ2V2Q3 67 aa4.38□□□□□ -1.71
SNF4YGL115W YOR376W-AQ3E805 51 aa4.38□□□□□ -1.71
SNF4YGL115W YOR316C-AQ3E806 69 aa4.38□□□□□ -1.71
SNF4YGL115W YGL034CP53186 121 aa4.35□□□□□ -1.71
SNF4YGL115W MRX7P53869 86 aa4.3□□□□□ -1.72
SNF4YGL115W YBR016WP38216 128 aa4.29□□□□□ -1.72
SNF4YGL115W RPL37BP51402 88 aaKnown RBP4.28□□□□□ -1.72
SNF4YGL115W OLI1P61829 76 aa4.27□□□□□ -1.73
SNF4YGL115W FYV12Q08559 129 aa4.25□□□□□ -1.73
SNF4YGL115W COX7P10174 60 aa4.22□□□□□ -1.73
SNF4YGL115W YJL144WP47009 104 aa4.18□□□□□ -1.74
SNF4YGL115W YGL014C-AP0C5N1 53 aa4.17□□□□□ -1.74
SNF4YGL115W DDR48P18899 430 aaKnown RBP4.17□□□□□ -1.74
SNF4YGL115W QCR10P37299 77 aa4.16□□□□□ -1.74
SNF4YGL115W YEL014CP39999 101 aa4.09□□□□□ -1.75
SNF4YGL115W YCR108CQ3E819 63 aa4.04□□□□□ -1.76
SNF4YGL115W YOR394C-AQ8TGJ0 55 aa4.03□□□□□ -1.76
SNF4YGL115W YER175W-AQ8TGU4 54 aa4.01□□□□□ -1.77
SNF4YGL115W SOM1Q05676 74 aa4□□□□□ -1.77
SNF4YGL115W YFL067WP43537 175 aa3.99□□□□□ -1.77
SNF4YGL115W YBL044WP38194 122 aa3.97□□□□□ -1.77
SNF4YGL115W RPL37AP49166 88 aaKnown RBP3.88□□□□□ -1.79
SNF4YGL115W YDR210WQ03482 75 aa3.86□□□□□ -1.79
SNF4YGL115W CMC4Q3E7A9 73 aa3.82□□□□□ -1.8
SNF4YGL115W Q0017Q9ZZX8 53 aa3.8□□□□□ -1.8
SNF4YGL115W YML054C-AQ3E809 52 aa3.78□□□□□ -1.8
SNF4YGL115W YOR072W-BQ3E832 53 aa3.75□□□□□ -1.81
SNF4YGL115W YJL009WP47078 108 aa3.72□□□□□ -1.81
SNF4YGL115W YBR072C-AQ3E794 53 aa3.71□□□□□ -1.82
SNF4YGL115W HHY1P39982 102 aa3.66□□□□□ -1.82
SNF4YGL115W MDN1Q12019 4910 aaKnown RBP3.59□□□□□ -1.84
SNF4YGL115W YER078W-AQ3E7A2 54 aa3.42□□□□□ -1.86
SNF4YGL115W YHR032W-AP0C5N6 59 aa3.13□□□□□ -1.91
SNF4YGL115W YHR050W-AQ05451 56 aa3□□□□□ -1.93
SNF4YGL115W YOL164W-AQ3E7A5 60 aa2.95□□□□□ -1.94
SNF4YGL115W YAL067W-AQ8TGK6 75 aa2.87□□□□□ -1.95
SNF4YGL115W RPS29BP41058 56 aaKnown RBP2.82□□□□□ -1.96
SNF4YGL115W RPS29AP41057 56 aaKnown RBP2.69□□□□□ -1.98
SNF4YGL115W YLR157W-EP0CF00 54 aa2.54□□□□□ -2
SNF4YGL115W YHR086W-AQ3E746 53 aa2.26□□□□□ -2.05
Retrieved 63 of 5,963 RNA–protein pairs in 4.7 ms