RNA–Protein interactions for RNA: YGL099W

LSG1, Transcript of Putative GTPase involved in 60S ribosomal subunit biogenesis, yeastyeast

Gene LSG1, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSG1YGL099W VPS13Q07878 3144 aa3.71□□□□□ -1.82
LSG1YGL099W YGL041C-BQ3E750 60 aa3.71□□□□□ -1.82
LSG1YGL099W TAR1Q8TGM6 124 aa3.71□□□□□ -1.82
LSG1YGL099W GIS2P53849 153 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
LSG1YGL099W YJR085CP47131 105 aaKnown RBP3.68□□□□□ -1.82
LSG1YGL099W RDS3Q06835 107 aaPredicted RBP3.68□□□□□ -1.82
LSG1YGL099W YMR230W-AQ3E7B5 62 aa3.68□□□□□ -1.82
LSG1YGL099W YOR394C-AQ8TGJ0 55 aa3.68□□□□□ -1.82
LSG1YGL099W YGR146C-AQ8TGT9 53 aa3.68□□□□□ -1.82
LSG1YGL099W RPL33BP41056 107 aaKnown RBP3.65□□□□□ -1.83
LSG1YGL099W YGR240C-AQ3E786 66 aa3.65□□□□□ -1.83
LSG1YGL099W RPL33AP05744 107 aaKnown RBP3.63□□□□□ -1.83
LSG1YGL099W HFA1P32874 2273 aa3.63□□□□□ -1.83
LSG1YGL099W YCR108CQ3E819 63 aa3.62□□□□□ -1.83
LSG1YGL099W RPL37BP51402 88 aaKnown RBP3.6□□□□□ -1.83
LSG1YGL099W COX7P10174 60 aa3.58□□□□□ -1.84
LSG1YGL099W YBL044WP38194 122 aa3.56□□□□□ -1.84
LSG1YGL099W YAL067W-AQ8TGK6 75 aa3.55□□□□□ -1.84
LSG1YGL099W OLI1P61829 76 aa3.52□□□□□ -1.85
LSG1YGL099W YOR316C-AQ3E806 69 aa3.52□□□□□ -1.85
LSG1YGL099W LCL1Q02786 101 aa3.5□□□□□ -1.85
LSG1YGL099W YHR073W-AP0C5N7 58 aa3.49□□□□□ -1.85
LSG1YGL099W YLL066W-BQ8TGJ7 56 aa3.49□□□□□ -1.85
LSG1YGL099W YBR016WP38216 128 aa3.48□□□□□ -1.85
LSG1YGL099W CSF1Q12150 2958 aa3.47□□□□□ -1.85
LSG1YGL099W YJL144WP47009 104 aa3.46□□□□□ -1.85
LSG1YGL099W YPR117WQ06116 2489 aa3.45□□□□□ -1.86
LSG1YGL099W GCN1P33892 2672 aaKnown RBP3.43□□□□□ -1.86
LSG1YGL099W YHR212W-AP0CX91 67 aa3.42□□□□□ -1.86
LSG1YGL099W YFL067WP43537 175 aa3.42□□□□□ -1.86
LSG1YGL099W TRA1P38811 3744 aa3.39□□□□□ -1.87
LSG1YGL099W IRA1P18963 3092 aa3.38□□□□□ -1.87
LSG1YGL099W NUM1Q00402 2748 aa3.36□□□□□ -1.87
LSG1YGL099W PRP8P33334 2413 aaKnown RBP3.35□□□□□ -1.87
LSG1YGL099W TOR1P35169 2470 aa3.35□□□□□ -1.87
LSG1YGL099W TAO3P40468 2376 aa3.33□□□□□ -1.88
LSG1YGL099W YDR034W-BQ6Q5X2 51 aa3.3□□□□□ -1.88
LSG1YGL099W MEC1P38111 2368 aa3.3□□□□□ -1.88
LSG1YGL099W YJL009WP47078 108 aa3.29□□□□□ -1.88
LSG1YGL099W CUP1-1P0CX80 61 aa3.28□□□□□ -1.88
LSG1YGL099W CUP1-2P0CX81 61 aa3.28□□□□□ -1.88
LSG1YGL099W YBR072C-AQ3E794 53 aa3.27□□□□□ -1.89
LSG1YGL099W HHY1P39982 102 aa3.25□□□□□ -1.89
LSG1YGL099W YDR034C-AP0C289 58 aa3.24□□□□□ -1.89
LSG1YGL099W RPL37AP49166 88 aaKnown RBP3.24□□□□□ -1.89
LSG1YGL099W YGL260WP53056 76 aa3.23□□□□□ -1.89
LSG1YGL099W TOR2P32600 2474 aaKnown RBP3.21□□□□□ -1.89
LSG1YGL099W UTP20P35194 2493 aaKnown RBP3.2□□□□□ -1.9
LSG1YGL099W Q0297Q9ZZV8 51 aa3.19□□□□□ -1.9
LSG1YGL099W YOR072W-BQ3E832 53 aa3.15□□□□□ -1.91
LSG1YGL099W TEL1P38110 2787 aa3.14□□□□□ -1.91
LSG1YGL099W FMP27Q06179 2628 aa3.08□□□□□ -1.92
LSG1YGL099W YBR056W-AI2HB52 66 aa2.99□□□□□ -1.93
LSG1YGL099W YOL164W-AQ3E7A5 60 aa2.93□□□□□ -1.94
LSG1YGL099W YHR086W-AQ3E746 53 aa2.83□□□□□ -1.96
LSG1YGL099W YML054C-AQ3E809 52 aa2.78□□□□□ -1.96
LSG1YGL099W DYN1P36022 4092 aa2.65□□□□□ -1.98
LSG1YGL099W Q0017Q9ZZX8 53 aa2.61□□□□□ -1.99
LSG1YGL099W YLR157W-EP0CF00 54 aa2.56□□□□□ -2
LSG1YGL099W YHR050W-AQ05451 56 aa2.42□□□□□ -2.02
LSG1YGL099W MDN1Q12019 4910 aaKnown RBP2.37□□□□□ -2.03
LSG1YGL099W RPS29AP41057 56 aaKnown RBP2.3□□□□□ -2.04
LSG1YGL099W RPS29BP41058 56 aaKnown RBP2.13□□□□□ -2.07
Retrieved 63 of 5,963 RNA–protein pairs in 5.3 ms