RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W YBR016WP38216 128 aa3.61□□□□□ -1.83
PDA1YER178W YOR314WQ12506 109 aa3.61□□□□□ -1.83
PDA1YER178W YOL166W-AQ8TGJ1 51 aa3.59□□□□□ -1.83
PDA1YER178W YDR210WQ03482 75 aa3.58□□□□□ -1.84
PDA1YER178W YGR146C-AQ8TGT9 53 aa3.58□□□□□ -1.84
PDA1YER178W RUB1Q03919 77 aa3.57□□□□□ -1.84
PDA1YER178W YBL008W-AQ3E821 79 aa3.56□□□□□ -1.84
PDA1YER178W YER175W-AQ8TGU4 54 aa3.56□□□□□ -1.84
PDA1YER178W YKL065W-AQ2V2P2 73 aa3.54□□□□□ -1.84
PDA1YER178W YHR125WP38831 101 aa3.53□□□□□ -1.84
PDA1YER178W YPL038W-AQ3E7B4 63 aa3.53□□□□□ -1.84
PDA1YER178W COX8P04039 78 aa3.52□□□□□ -1.85
PDA1YER178W AIM4P38305 123 aaPredicted RBP3.48□□□□□ -1.85
PDA1YER178W RPS30AP0CX33 63 aaKnown RBP3.47□□□□□ -1.85
PDA1YER178W RPS30BP0CX34 63 aaKnown RBP3.47□□□□□ -1.85
PDA1YER178W YDR182W-AQ3E796 67 aa3.44□□□□□ -1.86
PDA1YER178W YFR032C-BQ8TGU2 87 aa3.44□□□□□ -1.86
PDA1YER178W OLI1P61829 76 aa3.43□□□□□ -1.86
PDA1YER178W YGL034CP53186 121 aa3.42□□□□□ -1.86
PDA1YER178W YIL156W-BQ2V2P4 73 aa3.42□□□□□ -1.86
PDA1YER178W YBL044WP38194 122 aa3.37□□□□□ -1.87
PDA1YER178W SDH6Q3E785 79 aa3.34□□□□□ -1.87
PDA1YER178W TOM6P33448 61 aa3.33□□□□□ -1.88
PDA1YER178W YBR201C-AQ2V2Q3 67 aa3.32□□□□□ -1.88
PDA1YER178W MRX7P53869 86 aa3.3□□□□□ -1.88
PDA1YER178W OST5Q92316 86 aa3.3□□□□□ -1.88
PDA1YER178W YML054C-AQ3E809 52 aa3.28□□□□□ -1.88
PDA1YER178W YMR001C-AQ8TGS9 76 aa3.27□□□□□ -1.89
PDA1YER178W HUB1Q6Q546 73 aa3.21□□□□□ -1.9
PDA1YER178W YIL002W-AQ3E7Z5 69 aa3.2□□□□□ -1.9
PDA1YER178W RPL37AP49166 88 aaKnown RBP3.16□□□□□ -1.9
PDA1YER178W YOR394C-AQ8TGJ0 55 aa3.15□□□□□ -1.91
PDA1YER178W RPS29BP41058 56 aaKnown RBP3.08□□□□□ -1.92
PDA1YER178W ATP17Q06405 101 aa3.06□□□□□ -1.92
PDA1YER178W YMR122CQ03879 124 aa3.05□□□□□ -1.92
PDA1YER178W RPS29AP41057 56 aaKnown RBP3.03□□□□□ -1.92
PDA1YER178W YOR381W-AQ3E804 55 aa3.01□□□□□ -1.93
PDA1YER178W YCR108CQ3E819 63 aa3.01□□□□□ -1.93
PDA1YER178W YER188C-AP0C0V2 99 aa2.97□□□□□ -1.93
PDA1YER178W YCR095W-AQ3E787 52 aa2.94□□□□□ -1.94
PDA1YER178W YEL014CP39999 101 aa2.86□□□□□ -1.95
PDA1YER178W YIR021W-AQ3E739 70 aa2.85□□□□□ -1.95
PDA1YER178W YER078W-AQ3E7A2 54 aa2.85□□□□□ -1.95
PDA1YER178W YBR121C-AP0C5L4 52 aa2.83□□□□□ -1.96
PDA1YER178W YOR072W-BQ3E832 53 aa2.76□□□□□ -1.97
PDA1YER178W SBH1P52870 82 aa2.73□□□□□ -1.97
PDA1YER178W QCR10P37299 77 aa2.68□□□□□ -1.98
PDA1YER178W RPS28BP0C0X0 67 aaKnown RBP2.66□□□□□ -1.98
PDA1YER178W RPS28AQ3E7X9 67 aaPredicted RBP2.66□□□□□ -1.98
PDA1YER178W HHY1P39982 102 aa2.59□□□□□ -1.99
PDA1YER178W YGL014C-AP0C5N1 53 aa2.55□□□□□ -2
PDA1YER178W YLR412C-AQ3E742 68 aa2.52□□□□□ -2.01
PDA1YER178W SOM1Q05676 74 aa2.46□□□□□ -2.02
PDA1YER178W YNL277W-AQ3E7Z0 62 aa2.45□□□□□ -2.02
PDA1YER178W YAL067W-AQ8TGK6 75 aa2.45□□□□□ -2.02
PDA1YER178W YML100W-AQ8TGT0 57 aa2.41□□□□□ -2.02
PDA1YER178W YBR072C-AQ3E794 53 aa2.38□□□□□ -2.03
PDA1YER178W YHR032W-AP0C5N6 59 aa2.34□□□□□ -2.03
PDA1YER178W YHR050W-AQ05451 56 aa2.28□□□□□ -2.04
PDA1YER178W YOR376W-AQ3E805 51 aa2.23□□□□□ -2.05
PDA1YER178W YHR086W-AQ3E746 53 aa1.92□□□□□ -2.1
PDA1YER178W YOL164W-AQ3E7A5 60 aa1.78□□□□□ -2.12
PDA1YER178W YLR157W-EP0CF00 54 aa1.71□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 20.7 ms