RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C TOR2P32600 2474 aaKnown RBP2.99□□□□□ -1.93
SHO1YER118C RPL37AP49166 88 aaKnown RBP2.97□□□□□ -1.93
SHO1YER118C YBL039W-BP0C268 59 aa2.95□□□□□ -1.94
SHO1YER118C SEN1Q00416 2231 aaKnown RBP2.94□□□□□ -1.94
SHO1YER118C YLR157W-EP0CF00 54 aa2.92□□□□□ -1.94
SHO1YER118C YLR307C-AQ3E825 87 aa2.92□□□□□ -1.94
SHO1YER118C URA2P07259 2214 aaKnown RBP2.92□□□□□ -1.94
SHO1YER118C SIP18P50263 79 aa2.91□□□□□ -1.94
SHO1YER118C YBR200W-AQ3E755 54 aa2.91□□□□□ -1.94
SHO1YER118C COA2Q3E823 68 aa2.9□□□□□ -1.95
SHO1YER118C YOR192C-CQ3E736 78 aa2.89□□□□□ -1.95
SHO1YER118C GCN1P33892 2672 aaKnown RBP2.88□□□□□ -1.95
SHO1YER118C TEL1P38110 2787 aa2.88□□□□□ -1.95
SHO1YER118C YOR011W-AQ3E807 68 aa2.88□□□□□ -1.95
SHO1YER118C YOL164W-AQ3E7A5 60 aa2.86□□□□□ -1.95
SHO1YER118C YBR056W-AI2HB52 66 aa2.85□□□□□ -1.95
SHO1YER118C YGL258W-AQ3E740 77 aa2.85□□□□□ -1.95
SHO1YER118C YMR105W-AQ8TGS8 64 aa2.85□□□□□ -1.95
SHO1YER118C YMR001C-AQ8TGS9 76 aa2.85□□□□□ -1.95
SHO1YER118C RPL39P04650 51 aa2.82□□□□□ -1.96
SHO1YER118C YLR157W-DP0CE99 70 aa2.82□□□□□ -1.96
SHO1YER118C YOR394C-AQ8TGJ0 55 aa2.8□□□□□ -1.96
SHO1YER118C PRP8P33334 2413 aaKnown RBP2.77□□□□□ -1.97
SHO1YER118C OLI1P61829 76 aa2.76□□□□□ -1.97
SHO1YER118C TOR1P35169 2470 aa2.74□□□□□ -1.97
SHO1YER118C MEC1P38111 2368 aa2.73□□□□□ -1.97
SHO1YER118C RPL37BP51402 88 aaKnown RBP2.73□□□□□ -1.97
SHO1YER118C Q0297Q9ZZV8 51 aa2.72□□□□□ -1.97
SHO1YER118C TOM7P53507 60 aa2.71□□□□□ -1.98
SHO1YER118C YLR342W-AQ3E810 57 aa2.69□□□□□ -1.98
SHO1YER118C YFR009W-AP0C5M9 85 aa2.67□□□□□ -1.98
SHO1YER118C YBR016WP38216 128 aa2.67□□□□□ -1.98
SHO1YER118C CUP1-1P0CX80 61 aa2.66□□□□□ -1.98
SHO1YER118C CUP1-2P0CX81 61 aa2.66□□□□□ -1.98
SHO1YER118C YGR025WP53216 100 aa2.65□□□□□ -1.99
SHO1YER118C HOR7Q05827 59 aa2.65□□□□□ -1.99
SHO1YER118C DYN1P36022 4092 aa2.64□□□□□ -1.99
SHO1YER118C NUM1Q00402 2748 aa2.62□□□□□ -1.99
SHO1YER118C TOS6P48560 102 aa2.61□□□□□ -1.99
SHO1YER118C YBL044WP38194 122 aa2.56□□□□□ -2
SHO1YER118C YBR230W-AQ3E762 66 aa2.56□□□□□ -2
SHO1YER118C YOR008C-AQ3E7B9 74 aa2.56□□□□□ -2
SHO1YER118C PMP3P87284 55 aa2.51□□□□□ -2.01
SHO1YER118C YPR010C-AA5Z2X5 72 aa2.47□□□□□ -2.01
SHO1YER118C YLL066W-BQ8TGJ7 56 aa2.44□□□□□ -2.02
SHO1YER118C UTP20P35194 2493 aaKnown RBP2.44□□□□□ -2.02
SHO1YER118C RPL29P05747 59 aaPredicted RBP2.41□□□□□ -2.02
SHO1YER118C YLL006W-AQ3E814 58 aa2.4□□□□□ -2.03
SHO1YER118C RPS29BP41058 56 aaKnown RBP2.39□□□□□ -2.03
SHO1YER118C YCR108CQ3E819 63 aa2.36□□□□□ -2.03
SHO1YER118C YGR146C-AQ8TGT9 53 aa2.33□□□□□ -2.04
SHO1YER118C YJL127C-BQ3E828 52 aa2.3□□□□□ -2.04
SHO1YER118C MDN1Q12019 4910 aaKnown RBP2.28□□□□□ -2.04
SHO1YER118C YDR034C-AP0C289 58 aa2.27□□□□□ -2.05
SHO1YER118C DDR2P89113 61 aa2.25□□□□□ -2.05
SHO1YER118C YJL133C-AQ3E7A3 74 aa2.21□□□□□ -2.06
SHO1YER118C YHR073W-AP0C5N7 58 aa2.09□□□□□ -2.07
SHO1YER118C YOR316C-AQ3E806 69 aa2.02□□□□□ -2.09
SHO1YER118C YOR072W-BQ3E832 53 aa1.94□□□□□ -2.1
SHO1YER118C Q0017Q9ZZX8 53 aa1.85□□□□□ -2.11
SHO1YER118C RPS29AP41057 56 aaKnown RBP1.78□□□□□ -2.12
SHO1YER118C YML054C-AQ3E809 52 aa1.77□□□□□ -2.13
SHO1YER118C YHR050W-AQ05451 56 aa1.35□□□□□ -2.19
Retrieved 63 of 5,963 RNA–protein pairs in 4.9 ms