RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C QCR9P22289 66 aa0.4□□□□□ -2.35
SEC3YER008C COA2Q3E823 68 aa0.4□□□□□ -2.35
SEC3YER008C YLR157W-EP0CF00 54 aa0.39□□□□□ -2.35
SEC3YER008C YKL065W-AQ2V2P2 73 aa0.39□□□□□ -2.35
SEC3YER008C YOR105WQ08504 108 aa0.38□□□□□ -2.35
SEC3YER008C SSS1P35179 80 aa0.38□□□□□ -2.35
SEC3YER008C EDC1P53080 175 aaPredicted RBP0.37□□□□□ -2.35
SEC3YER008C YBR016WP38216 128 aa0.37□□□□□ -2.35
SEC3YER008C ATP18P81450 59 aa0.36□□□□□ -2.35
SEC3YER008C ATX1P38636 73 aa0.36□□□□□ -2.35
SEC3YER008C SGF11Q03067 99 aa0.35□□□□□ -2.35
SEC3YER008C YOL166W-AQ8TGJ1 51 aa0.35□□□□□ -2.35
SEC3YER008C COX7P10174 60 aa0.35□□□□□ -2.35
SEC3YER008C YBR200W-AQ3E755 54 aa0.35□□□□□ -2.35
SEC3YER008C YBR072C-AQ3E794 53 aa0.35□□□□□ -2.35
SEC3YER008C YLR342W-AQ3E810 57 aa0.34□□□□□ -2.35
SEC3YER008C YIL134C-AQ45U18 67 aa0.34□□□□□ -2.36
SEC3YER008C ATP17Q06405 101 aa0.34□□□□□ -2.36
SEC3YER008C YOL164W-AQ3E7A5 60 aa0.33□□□□□ -2.36
SEC3YER008C YKL023C-AQ2V2P3 75 aa0.32□□□□□ -2.36
SEC3YER008C RPS30AP0CX33 63 aaKnown RBP0.32□□□□□ -2.36
SEC3YER008C RPS30BP0CX34 63 aaKnown RBP0.32□□□□□ -2.36
SEC3YER008C YIL102C-AQ2V2P5 75 aa0.31□□□□□ -2.36
SEC3YER008C YSY6P38374 65 aa0.31□□□□□ -2.36
SEC3YER008C VMA9Q3E7B6 73 aa0.31□□□□□ -2.36
SEC3YER008C PAU7P39545 55 aa0.3□□□□□ -2.36
SEC3YER008C RPL29P05747 59 aaPredicted RBP0.3□□□□□ -2.36
SEC3YER008C YJR107C-AP0CT86 78 aa0.3□□□□□ -2.36
SEC3YER008C TOM7P53507 60 aa0.3□□□□□ -2.36
SEC3YER008C SDH6Q3E785 79 aa0.3□□□□□ -2.36
SEC3YER008C YOR011W-AQ3E807 68 aa0.3□□□□□ -2.36
SEC3YER008C YPR010C-AA5Z2X5 72 aa0.3□□□□□ -2.36
SEC3YER008C RPL38P49167 78 aaKnown RBP0.29□□□□□ -2.36
SEC3YER008C TOS6P48560 102 aa0.29□□□□□ -2.36
SEC3YER008C YOL097W-AQ3E7Y9 61 aa0.29□□□□□ -2.36
SEC3YER008C YBL044WP38194 122 aa0.29□□□□□ -2.36
SEC3YER008C YDR182W-AQ3E796 67 aa0.29□□□□□ -2.36
SEC3YER008C YDR034C-AP0C289 58 aa0.29□□□□□ -2.36
SEC3YER008C YFR009W-AP0C5M9 85 aa0.27□□□□□ -2.37
SEC3YER008C YBL039W-BP0C268 59 aa0.27□□□□□ -2.37
SEC3YER008C YOR394C-AQ8TGJ0 55 aa0.26□□□□□ -2.37
SEC3YER008C PMP3P87284 55 aa0.24□□□□□ -2.37
SEC3YER008C RPS29BP41058 56 aaKnown RBP0.23□□□□□ -2.37
SEC3YER008C YMR001C-AQ8TGS9 76 aa0.23□□□□□ -2.37
SEC3YER008C YHR073W-AP0C5N7 58 aa0.22□□□□□ -2.37
SEC3YER008C YBR230W-AQ3E762 66 aa0.22□□□□□ -2.37
SEC3YER008C HUB1Q6Q546 73 aa0.22□□□□□ -2.37
SEC3YER008C YCR108CQ3E819 63 aa0.21□□□□□ -2.38
SEC3YER008C YLR146W-AQ2V2P1 62 aa0.21□□□□□ -2.38
SEC3YER008C YLR157W-DP0CE99 70 aa0.2□□□□□ -2.38
SEC3YER008C Q0017Q9ZZX8 53 aa0.2□□□□□ -2.38
SEC3YER008C RPS29AP41057 56 aaKnown RBP0.2□□□□□ -2.38
SEC3YER008C YLL006W-AQ3E814 58 aa0.2□□□□□ -2.38
SEC3YER008C YOR008C-AQ3E7B9 74 aa0.2□□□□□ -2.38
SEC3YER008C DDR2P89113 61 aa0.16□□□□□ -2.38
SEC3YER008C YJL127C-BQ3E828 52 aa0.16□□□□□ -2.38
SEC3YER008C YOR316C-AQ3E806 69 aa0.15□□□□□ -2.39
SEC3YER008C OLI1P61829 76 aa0.12□□□□□ -2.39
SEC3YER008C YGR146C-AQ8TGT9 53 aa0.12□□□□□ -2.39
SEC3YER008C YJL133C-AQ3E7A3 74 aa0.1□□□□□ -2.39
SEC3YER008C YML054C-AQ3E809 52 aa0.07□□□□□ -2.4
SEC3YER008C YOR072W-BQ3E832 53 aa-0.03□□□□□ -2.42
SEC3YER008C YHR050W-AQ05451 56 aa-0.05□□□□□ -2.42
Retrieved 63 of 5,963 RNA–protein pairs in 43 ms