RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C YIR021W-AQ3E739 70 aa3.33□□□□□ -1.88
SEC20YDR498C KTI11Q3E840 82 aa3.32□□□□□ -1.88
SEC20YDR498C YGR164WP53291 111 aa3.3□□□□□ -1.88
SEC20YDR498C YLR255CO13574 117 aa3.29□□□□□ -1.88
SEC20YDR498C YJL144WP47009 104 aa3.28□□□□□ -1.88
SEC20YDR498C HHF1P02309 103 aaKnown RBP3.27□□□□□ -1.89
SEC20YDR498C YNL122CP53921 115 aaPredicted RBP3.27□□□□□ -1.89
SEC20YDR498C YGR146C-AQ8TGT9 53 aa3.26□□□□□ -1.89
SEC20YDR498C COX7P10174 60 aa3.24□□□□□ -1.89
SEC20YDR498C YKL065W-AQ2V2P2 73 aa3.23□□□□□ -1.89
SEC20YDR498C SDH6Q3E785 79 aa3.23□□□□□ -1.89
SEC20YDR498C YBR016WP38216 128 aa3.22□□□□□ -1.89
SEC20YDR498C YFR032C-BQ8TGU2 87 aa3.22□□□□□ -1.89
SEC20YDR498C YBR121C-AP0C5L4 52 aa3.19□□□□□ -1.9
SEC20YDR498C YMR001C-AQ8TGS9 76 aa3.19□□□□□ -1.9
SEC20YDR498C COX8P04039 78 aa3.18□□□□□ -1.9
SEC20YDR498C YBL008W-AQ3E821 79 aa3.18□□□□□ -1.9
SEC20YDR498C RPL37BP51402 88 aaKnown RBP3.17□□□□□ -1.9
SEC20YDR498C YMR122CQ03879 124 aa3.16□□□□□ -1.9
SEC20YDR498C YOR381W-AQ3E804 55 aa3.16□□□□□ -1.9
SEC20YDR498C SBH1P52870 82 aa3.12□□□□□ -1.91
SEC20YDR498C CMC4Q3E7A9 73 aa3.12□□□□□ -1.91
SEC20YDR498C OST5Q92316 86 aa3.12□□□□□ -1.91
SEC20YDR498C YER188C-AP0C0V2 99 aa3.1□□□□□ -1.91
SEC20YDR498C OLI1P61829 76 aa3.1□□□□□ -1.91
SEC20YDR498C YBR201C-AQ2V2Q3 67 aa3.1□□□□□ -1.91
SEC20YDR498C HUB1Q6Q546 73 aa3.1□□□□□ -1.91
SEC20YDR498C FYV12Q08559 129 aa3.07□□□□□ -1.92
SEC20YDR498C YIL156W-BQ2V2P4 73 aa3.07□□□□□ -1.92
SEC20YDR498C MRX7P53869 86 aa3.05□□□□□ -1.92
SEC20YDR498C RPS28BP0C0X0 67 aaKnown RBP3.01□□□□□ -1.93
SEC20YDR498C YCR095W-AQ3E787 52 aa3.01□□□□□ -1.93
SEC20YDR498C RPS28AQ3E7X9 67 aaPredicted RBP3.01□□□□□ -1.93
SEC20YDR498C YJL009WP47078 108 aa3□□□□□ -1.93
SEC20YDR498C YLR412C-AQ3E742 68 aa2.97□□□□□ -1.93
SEC20YDR498C ATP17Q06405 101 aa2.96□□□□□ -1.94
SEC20YDR498C Q0017Q9ZZX8 53 aa2.95□□□□□ -1.94
SEC20YDR498C YBL044WP38194 122 aa2.94□□□□□ -1.94
SEC20YDR498C YGL034CP53186 121 aa2.93□□□□□ -1.94
SEC20YDR498C YDR210WQ03482 75 aa2.88□□□□□ -1.95
SEC20YDR498C YCR108CQ3E819 63 aa2.88□□□□□ -1.95
SEC20YDR498C YOR394C-AQ8TGJ0 55 aa2.88□□□□□ -1.95
SEC20YDR498C YEL014CP39999 101 aa2.8□□□□□ -1.96
SEC20YDR498C YER078W-AQ3E7A2 54 aa2.8□□□□□ -1.96
SEC20YDR498C RPL37AP49166 88 aaKnown RBP2.79□□□□□ -1.96
SEC20YDR498C YNL277W-AQ3E7Z0 62 aa2.79□□□□□ -1.96
SEC20YDR498C YML054C-AQ3E809 52 aa2.79□□□□□ -1.96
SEC20YDR498C YAL067W-AQ8TGK6 75 aa2.73□□□□□ -1.97
SEC20YDR498C YGL014C-AP0C5N1 53 aa2.72□□□□□ -1.97
SEC20YDR498C QCR10P37299 77 aa2.72□□□□□ -1.97
SEC20YDR498C YOR376W-AQ3E805 51 aa2.72□□□□□ -1.97
SEC20YDR498C YML100W-AQ8TGT0 57 aa2.71□□□□□ -1.98
SEC20YDR498C YHR032W-AP0C5N6 59 aa2.58□□□□□ -2
SEC20YDR498C SOM1Q05676 74 aa2.58□□□□□ -2
SEC20YDR498C YOR072W-BQ3E832 53 aa2.57□□□□□ -2
SEC20YDR498C HHY1P39982 102 aa2.5□□□□□ -2.01
SEC20YDR498C YBR072C-AQ3E794 53 aa2.4□□□□□ -2.03
SEC20YDR498C RPS29BP41058 56 aaKnown RBP2.32□□□□□ -2.04
SEC20YDR498C RPS29AP41057 56 aaKnown RBP2.21□□□□□ -2.06
SEC20YDR498C YHR086W-AQ3E746 53 aa2.14□□□□□ -2.07
SEC20YDR498C YHR050W-AQ05451 56 aa2.07□□□□□ -2.08
SEC20YDR498C YOL164W-AQ3E7A5 60 aa1.92□□□□□ -2.1
SEC20YDR498C YLR157W-EP0CF00 54 aa1.66□□□□□ -2.14
Retrieved 63 of 5,963 RNA–protein pairs in 17.4 ms