RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W AUA1P32450 94 aa2.71□□□□□ -1.98
HSP42YDR171W SNA2P56508 79 aa2.71□□□□□ -1.98
HSP42YDR171W YLL066W-BQ8TGJ7 56 aa2.71□□□□□ -1.98
HSP42YDR171W YBR027CP38220 110 aa2.7□□□□□ -1.98
HSP42YDR171W ATP17Q06405 101 aa2.7□□□□□ -1.98
HSP42YDR171W YPR195CQ06594 109 aa2.69□□□□□ -1.98
HSP42YDR171W YGL149WP53116 101 aa2.68□□□□□ -1.98
HSP42YDR171W YIL156W-BQ2V2P4 73 aa2.68□□□□□ -1.98
HSP42YDR171W YFR032C-BQ8TGU2 87 aa2.67□□□□□ -1.98
HSP42YDR171W TEL1P38110 2787 aa2.66□□□□□ -1.98
HSP42YDR171W YOL097W-AQ3E7Y9 61 aa2.65□□□□□ -1.99
HSP42YDR171W YBL008W-AQ3E821 79 aa2.65□□□□□ -1.99
HSP42YDR171W YBR056W-AI2HB52 66 aa2.64□□□□□ -1.99
HSP42YDR171W MRX7P53869 86 aa2.64□□□□□ -1.99
HSP42YDR171W YNL122CP53921 115 aaPredicted RBP2.63□□□□□ -1.99
HSP42YDR171W LCL2Q08045 131 aa2.62□□□□□ -1.99
HSP42YDR171W DDR48P18899 430 aaKnown RBP2.61□□□□□ -1.99
HSP42YDR171W YBR201C-AQ2V2Q3 67 aa2.6□□□□□ -1.99
HSP42YDR171W YGR146C-AQ8TGT9 53 aa2.6□□□□□ -1.99
HSP42YDR171W YLR255CO13574 117 aa2.59□□□□□ -1.99
HSP42YDR171W YHR073W-AP0C5N7 58 aa2.59□□□□□ -1.99
HSP42YDR171W QCR10P37299 77 aa2.59□□□□□ -1.99
HSP42YDR171W TOR1P35169 2470 aa2.59□□□□□ -2
HSP42YDR171W YJR128WP47162 119 aa2.58□□□□□ -2
HSP42YDR171W COX8P04039 78 aa2.57□□□□□ -2
HSP42YDR171W YDR034C-AP0C289 58 aa2.55□□□□□ -2
HSP42YDR171W YGL014C-AP0C5N1 53 aa2.55□□□□□ -2
HSP42YDR171W RPL43AP0CX25 92 aaKnown RBP2.55□□□□□ -2
HSP42YDR171W RPL43BP0CX26 92 aa2.55□□□□□ -2
HSP42YDR171W FYV12Q08559 129 aa2.55□□□□□ -2
HSP42YDR171W SOM1Q05676 74 aa2.53□□□□□ -2
HSP42YDR171W YOR316C-AQ3E806 69 aa2.53□□□□□ -2
HSP42YDR171W RPL37BP51402 88 aaKnown RBP2.52□□□□□ -2.01
HSP42YDR171W OLI1P61829 76 aa2.52□□□□□ -2.01
HSP42YDR171W YJL144WP47009 104 aa2.5□□□□□ -2.01
HSP42YDR171W YBR016WP38216 128 aa2.48□□□□□ -2.01
HSP42YDR171W LCL1Q02786 101 aa2.47□□□□□ -2.01
HSP42YDR171W YEL014CP39999 101 aa2.46□□□□□ -2.02
HSP42YDR171W DYN1P36022 4092 aa2.45□□□□□ -2.02
HSP42YDR171W YCL042WP25572 119 aa2.44□□□□□ -2.02
HSP42YDR171W YOR394C-AQ8TGJ0 55 aa2.43□□□□□ -2.02
HSP42YDR171W COX7P10174 60 aa2.41□□□□□ -2.02
HSP42YDR171W YCR108CQ3E819 63 aa2.39□□□□□ -2.03
HSP42YDR171W YBL044WP38194 122 aa2.38□□□□□ -2.03
HSP42YDR171W YDR210WQ03482 75 aa2.38□□□□□ -2.03
HSP42YDR171W CUP1-1P0CX80 61 aa2.36□□□□□ -2.03
HSP42YDR171W CUP1-2P0CX81 61 aa2.36□□□□□ -2.03
HSP42YDR171W YHR032W-AP0C5N6 59 aa2.35□□□□□ -2.03
HSP42YDR171W CMC4Q3E7A9 73 aa2.29□□□□□ -2.04
HSP42YDR171W RPL37AP49166 88 aaKnown RBP2.28□□□□□ -2.04
HSP42YDR171W YBR072C-AQ3E794 53 aa2.25□□□□□ -2.05
HSP42YDR171W YOR072W-BQ3E832 53 aa2.24□□□□□ -2.05
HSP42YDR171W HHY1P39982 102 aa2.19□□□□□ -2.06
HSP42YDR171W YML054C-AQ3E809 52 aa2.19□□□□□ -2.06
HSP42YDR171W YJL009WP47078 108 aa2.17□□□□□ -2.06
HSP42YDR171W Q0017Q9ZZX8 53 aa2.16□□□□□ -2.06
HSP42YDR171W YHR086W-AQ3E746 53 aa2.11□□□□□ -2.07
HSP42YDR171W MDN1Q12019 4910 aaKnown RBP1.84□□□□□ -2.12
HSP42YDR171W YOL164W-AQ3E7A5 60 aa1.82□□□□□ -2.12
HSP42YDR171W YHR050W-AQ05451 56 aa1.78□□□□□ -2.12
HSP42YDR171W RPS29AP41057 56 aaKnown RBP1.63□□□□□ -2.15
HSP42YDR171W YLR157W-EP0CF00 54 aa1.56□□□□□ -2.16
HSP42YDR171W RPS29BP41058 56 aaKnown RBP1.55□□□□□ -2.16
Retrieved 63 of 5,963 RNA–protein pairs in 117 ms