RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeastyeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC13YDL220C RPL43AP0CX25 92 aaKnown RBP4.65□□□□□ -1.66
CDC13YDL220C RPL43BP0CX26 92 aa4.65□□□□□ -1.66
CDC13YDL220C RPC10P40422 70 aa4.65□□□□□ -1.66
CDC13YDL220C YCL042WP25572 119 aa4.65□□□□□ -1.67
CDC13YDL220C YBR201C-AQ2V2Q3 67 aa4.64□□□□□ -1.67
CDC13YDL220C PRP8P33334 2413 aaKnown RBP4.64□□□□□ -1.67
CDC13YDL220C YMR230W-AQ3E7B5 62 aa4.64□□□□□ -1.67
CDC13YDL220C YCR041WP37265 110 aa4.63□□□□□ -1.67
CDC13YDL220C YOR072WQ08486 104 aa4.63□□□□□ -1.67
CDC13YDL220C GIS2P53849 153 aaKnown RBP RIP-Chip data4.62□□□□□ -1.67not detected
CDC13YDL220C HOR7Q05827 59 aa4.61□□□□□ -1.67
CDC13YDL220C YJR128WP47162 119 aa4.6□□□□□ -1.67
CDC13YDL220C COX8P04039 78 aa4.59□□□□□ -1.68
CDC13YDL220C YEL014CP39999 101 aa4.57□□□□□ -1.68
CDC13YDL220C YDR115WQ04598 105 aa4.56□□□□□ -1.68
CDC13YDL220C RDS3Q06835 107 aaPredicted RBP4.54□□□□□ -1.68
CDC13YDL220C YGR240C-AQ3E786 66 aa4.54□□□□□ -1.68
CDC13YDL220C YLR255CO13574 117 aa4.52□□□□□ -1.69
CDC13YDL220C YOL097W-AQ3E7Y9 61 aa4.52□□□□□ -1.69
CDC13YDL220C YGR146C-AQ8TGT9 53 aa4.5□□□□□ -1.69
CDC13YDL220C RPL33BP41056 107 aaKnown RBP4.49□□□□□ -1.69
CDC13YDL220C MEC1P38111 2368 aa4.49□□□□□ -1.69
CDC13YDL220C RPL33AP05744 107 aaKnown RBP4.48□□□□□ -1.69
CDC13YDL220C UTP20P35194 2493 aaKnown RBP4.47□□□□□ -1.69
CDC13YDL220C YCR108CQ3E819 63 aa4.46□□□□□ -1.7
CDC13YDL220C YOR394C-AQ8TGJ0 55 aa4.45□□□□□ -1.7
CDC13YDL220C YPR195CQ06594 109 aa4.43□□□□□ -1.7
CDC13YDL220C YGL260WP53056 76 aa4.42□□□□□ -1.7
CDC13YDL220C YGL041C-BQ3E750 60 aa4.41□□□□□ -1.7
CDC13YDL220C YHR032W-AP0C5N6 59 aa4.41□□□□□ -1.7
CDC13YDL220C YBL044WP38194 122 aa4.4□□□□□ -1.7
CDC13YDL220C YLR122CQ12312 125 aa4.4□□□□□ -1.71
CDC13YDL220C YHR212W-AP0CX91 67 aa4.38□□□□□ -1.71
CDC13YDL220C YLL066W-BQ8TGJ7 56 aa4.38□□□□□ -1.71
CDC13YDL220C RPL37BP51402 88 aaKnown RBP4.37□□□□□ -1.71
CDC13YDL220C YOR316C-AQ3E806 69 aa4.35□□□□□ -1.71
CDC13YDL220C OLI1P61829 76 aa4.34□□□□□ -1.72
CDC13YDL220C YJR085CP47131 105 aaKnown RBP4.31□□□□□ -1.72
CDC13YDL220C YJL144WP47009 104 aa4.31□□□□□ -1.72
CDC13YDL220C COX7P10174 60 aa4.28□□□□□ -1.72
CDC13YDL220C YBR016WP38216 128 aa4.27□□□□□ -1.73
CDC13YDL220C Q0297Q9ZZV8 51 aa4.26□□□□□ -1.73
CDC13YDL220C YHR073W-AP0C5N7 58 aa4.25□□□□□ -1.73
CDC13YDL220C LCL1Q02786 101 aa4.22□□□□□ -1.73
CDC13YDL220C YBR056W-AI2HB52 66 aa4.2□□□□□ -1.74
CDC13YDL220C YAL067W-AQ8TGK6 75 aa4.16□□□□□ -1.74
CDC13YDL220C YDR034C-AP0C289 58 aa4.05□□□□□ -1.76
CDC13YDL220C HHY1P39982 102 aa4□□□□□ -1.77
CDC13YDL220C YFL067WP43537 175 aa3.95□□□□□ -1.78
CDC13YDL220C RPL37AP49166 88 aaKnown RBP3.94□□□□□ -1.78
CDC13YDL220C YBR072C-AQ3E794 53 aa3.93□□□□□ -1.78
CDC13YDL220C YJL009WP47078 108 aa3.93□□□□□ -1.78
CDC13YDL220C YOR072W-BQ3E832 53 aa3.84□□□□□ -1.8
CDC13YDL220C DYN1P36022 4092 aa3.81□□□□□ -1.8
CDC13YDL220C MDN1Q12019 4910 aaKnown RBP3.72□□□□□ -1.81
CDC13YDL220C YOL164W-AQ3E7A5 60 aa3.57□□□□□ -1.84
CDC13YDL220C YML054C-AQ3E809 52 aa3.42□□□□□ -1.86
CDC13YDL220C YHR086W-AQ3E746 53 aa3.31□□□□□ -1.88
CDC13YDL220C Q0017Q9ZZX8 53 aa3.24□□□□□ -1.89
CDC13YDL220C YLR157W-EP0CF00 54 aa3.06□□□□□ -1.92
CDC13YDL220C YHR050W-AQ05451 56 aa2.94□□□□□ -1.94
CDC13YDL220C RPS29AP41057 56 aaKnown RBP2.72□□□□□ -1.97
CDC13YDL220C RPS29BP41058 56 aaKnown RBP2.49□□□□□ -2.01
Retrieved 63 of 5,963 RNA–protein pairs in 9.8 ms