RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C YOR394C-AQ8TGJ0 55 aa2.45□□□□□ -2.02
RPO21YDL140C Q0142Q9ZZW4 58 aa2.45□□□□□ -2.02
RPO21YDL140C YML122CQ03207 126 aa2.44□□□□□ -2.02
RPO21YDL140C YMR122CQ03879 124 aa2.44□□□□□ -2.02
RPO21YDL140C YGR146C-AQ8TGT9 53 aa2.44□□□□□ -2.02
RPO21YDL140C YBL008W-AQ3E821 79 aa2.44□□□□□ -2.02
RPO21YDL140C YMR001C-AQ8TGS9 76 aa2.44□□□□□ -2.02
RPO21YDL140C RPS28BP0C0X0 67 aaKnown RBP2.43□□□□□ -2.02
RPO21YDL140C YHR050W-AQ05451 56 aa2.43□□□□□ -2.02
RPO21YDL140C TDA8Q6B2U8 126 aa2.43□□□□□ -2.02
RPO21YDL140C RPS28AQ3E7X9 67 aaPredicted RBP2.42□□□□□ -2.02
RPO21YDL140C TOM6P33448 61 aa2.42□□□□□ -2.02
RPO21YDL140C YBR016WP38216 128 aa2.41□□□□□ -2.02
RPO21YDL140C YDL022C-AP0C5L6 82 aa2.39□□□□□ -2.03
RPO21YDL140C YOR381W-AQ3E804 55 aa2.39□□□□□ -2.03
RPO21YDL140C YHR125WP38831 101 aa2.38□□□□□ -2.03
RPO21YDL140C YER188C-AP0C0V2 99 aa2.38□□□□□ -2.03
RPO21YDL140C YDR182W-AQ3E796 67 aa2.38□□□□□ -2.03
RPO21YDL140C YAL067W-AQ8TGK6 75 aa2.37□□□□□ -2.03
RPO21YDL140C HHY1P39982 102 aa2.37□□□□□ -2.03
RPO21YDL140C YBR072C-AQ3E794 53 aa2.36□□□□□ -2.03
RPO21YDL140C YOL013W-AP0C272 63 aaPredicted RBP2.36□□□□□ -2.03
RPO21YDL140C YDL012CQ12489 107 aa2.35□□□□□ -2.03
RPO21YDL140C YLR412C-AQ3E742 68 aa2.35□□□□□ -2.03
RPO21YDL140C YMR230W-AQ3E7B5 62 aa2.34□□□□□ -2.03
RPO21YDL140C GCN1P33892 2672 aaKnown RBP2.34□□□□□ -2.03
RPO21YDL140C YJR128WP47162 119 aa2.32□□□□□ -2.04
RPO21YDL140C YBR056W-AI2HB52 66 aa2.31□□□□□ -2.04
RPO21YDL140C YDR210WQ03482 75 aa2.3□□□□□ -2.04
RPO21YDL140C SOM1Q05676 74 aa2.3□□□□□ -2.04
RPO21YDL140C EDC1P53080 175 aaPredicted RBP2.3□□□□□ -2.04
RPO21YDL140C YNR077CP53758 84 aa2.3□□□□□ -2.04
RPO21YDL140C YNL198CP40166 100 aa2.3□□□□□ -2.04
RPO21YDL140C QCR10P37299 77 aa2.28□□□□□ -2.04
RPO21YDL140C YPL038W-AQ3E7B4 63 aa2.27□□□□□ -2.05
RPO21YDL140C NOP10Q6Q547 58 aaPredicted RBP2.24□□□□□ -2.05
RPO21YDL140C YBR121C-AP0C5L4 52 aa2.23□□□□□ -2.05
RPO21YDL140C SBH1P52870 82 aa2.21□□□□□ -2.06
RPO21YDL140C YNL277W-AQ3E7Z0 62 aa2.21□□□□□ -2.06
RPO21YDL140C RPL37BP51402 88 aaKnown RBP2.19□□□□□ -2.06
RPO21YDL140C YLR157W-EP0CF00 54 aa2.17□□□□□ -2.06
RPO21YDL140C YER175W-AQ8TGU4 54 aa2.15□□□□□ -2.07
RPO21YDL140C YGL014C-AP0C5N1 53 aa2.13□□□□□ -2.07
RPO21YDL140C NUM1Q00402 2748 aa2.1□□□□□ -2.07
RPO21YDL140C YHR032W-AP0C5N6 59 aa2.09□□□□□ -2.07
RPO21YDL140C RPL37AP49166 88 aaKnown RBP2.05□□□□□ -2.08
RPO21YDL140C YDR246W-AQ3E763 66 aa2.04□□□□□ -2.08
RPO21YDL140C TEL1P38110 2787 aa2.02□□□□□ -2.09
RPO21YDL140C YCR108CQ3E819 63 aa1.98□□□□□ -2.09
RPO21YDL140C YER078W-AQ3E7A2 54 aa1.96□□□□□ -2.1
RPO21YDL140C TOM1Q03280 3268 aa1.94□□□□□ -2.1
RPO21YDL140C YOL166W-AQ8TGJ1 51 aa1.93□□□□□ -2.1
RPO21YDL140C YOL164W-AQ3E7A5 60 aa1.93□□□□□ -2.1
RPO21YDL140C YML100W-AQ8TGT0 57 aa1.86□□□□□ -2.11
RPO21YDL140C YOR376W-AQ3E805 51 aa1.86□□□□□ -2.11
RPO21YDL140C VPS13Q07878 3144 aa1.71□□□□□ -2.14
RPO21YDL140C IRA1P18963 3092 aa1.65□□□□□ -2.15
RPO21YDL140C TRA1P38811 3744 aa1.6□□□□□ -2.15
RPO21YDL140C CSF1Q12150 2958 aa1.46□□□□□ -2.18
RPO21YDL140C IRA2P19158 3079 aa1.43□□□□□ -2.18
RPO21YDL140C YHR086W-AQ3E746 53 aa1.38□□□□□ -2.19
RPO21YDL140C MDN1Q12019 4910 aaKnown RBP1.33□□□□□ -2.2
RPO21YDL140C DYN1P36022 4092 aa1.1□□□□□ -2.23
Retrieved 63 of 5,963 RNA–protein pairs in 17 ms