RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C YMR122W-AQ3E842 84 aa3.01□□□□□ -1.93
CDC48YDL126C YNL122CP53921 115 aaPredicted RBP3□□□□□ -1.93
CDC48YDL126C AQY2P0CD90 149 aa2.99□□□□□ -1.93
CDC48YDL126C COX8P04039 78 aa2.98□□□□□ -1.93
CDC48YDL126C YIL102CP40488 101 aa2.98□□□□□ -1.93
CDC48YDL126C DDR2P89113 61 aa2.98□□□□□ -1.93
CDC48YDL126C RDS3Q06835 107 aaPredicted RBP2.98□□□□□ -1.93
CDC48YDL126C YOR034C-AQ3E735 80 aa2.98□□□□□ -1.93
CDC48YDL126C RPL33BP41056 107 aaKnown RBP2.96□□□□□ -1.93
CDC48YDL126C YHR213W-BQ8TGK1 99 aa2.96□□□□□ -1.93
CDC48YDL126C YBR230W-AQ3E762 66 aa2.96□□□□□ -1.94
CDC48YDL126C NUM1Q00402 2748 aa2.96□□□□□ -1.94
CDC48YDL126C RPL33AP05744 107 aaKnown RBP2.95□□□□□ -1.94
CDC48YDL126C YBL039W-BP0C268 59 aa2.95□□□□□ -1.94
CDC48YDL126C AUA1P32450 94 aa2.95□□□□□ -1.94
CDC48YDL126C YJL133C-AQ3E7A3 74 aa2.95□□□□□ -1.94
CDC48YDL126C YGL014C-AP0C5N1 53 aa2.94□□□□□ -1.94
CDC48YDL126C RPC10P40422 70 aa2.93□□□□□ -1.94
CDC48YDL126C MVB12P42939 101 aa2.93□□□□□ -1.94
CDC48YDL126C YJL127C-BQ3E828 52 aa2.91□□□□□ -1.94
CDC48YDL126C YLL066W-BQ8TGJ7 56 aa2.91□□□□□ -1.94
CDC48YDL126C DYN1P36022 4092 aa2.91□□□□□ -1.94
CDC48YDL126C YEL014CP39999 101 aa2.89□□□□□ -1.95
CDC48YDL126C YAR064WP39563 99 aa2.89□□□□□ -1.95
CDC48YDL126C YDL012CQ12489 107 aa2.88□□□□□ -1.95
CDC48YDL126C YGL041C-BQ3E750 60 aa2.87□□□□□ -1.95
CDC48YDL126C YDR210WQ03482 75 aa2.87□□□□□ -1.95
CDC48YDL126C LCL2Q08045 131 aa2.85□□□□□ -1.95
CDC48YDL126C UTP20P35194 2493 aaKnown RBP2.84□□□□□ -1.95
CDC48YDL126C YJL144WP47009 104 aa2.83□□□□□ -1.96
CDC48YDL126C Q0032Q9ZZX7 96 aa2.83□□□□□ -1.96
CDC48YDL126C YLR255CO13574 117 aa2.82□□□□□ -1.96
CDC48YDL126C YOR072WQ08486 104 aa2.8□□□□□ -1.96
CDC48YDL126C YBR201C-AQ2V2Q3 67 aa2.8□□□□□ -1.96
CDC48YDL126C YDR034C-AP0C289 58 aa2.79□□□□□ -1.96
CDC48YDL126C YGR146C-AQ8TGT9 53 aa2.79□□□□□ -1.96
CDC48YDL126C YHR073W-AP0C5N7 58 aa2.78□□□□□ -1.96
CDC48YDL126C COX7P10174 60 aa2.78□□□□□ -1.96
CDC48YDL126C OLI1P61829 76 aa2.77□□□□□ -1.97
CDC48YDL126C YOR394C-AQ8TGJ0 55 aa2.77□□□□□ -1.97
CDC48YDL126C RPL37BP51402 88 aaKnown RBP2.76□□□□□ -1.97
CDC48YDL126C GIS2P53849 153 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97 RIP-Chip
CDC48YDL126C YJL009WP47078 108 aa2.74□□□□□ -1.97
CDC48YDL126C YHR007C-AQ07074 71 aa2.74□□□□□ -1.97
CDC48YDL126C YOR316C-AQ3E806 69 aa2.73□□□□□ -1.97
CDC48YDL126C LCL1Q02786 101 aa2.71□□□□□ -1.98
CDC48YDL126C YJR128WP47162 119 aa2.66□□□□□ -1.98
CDC48YDL126C YBR072C-AQ3E794 53 aa2.63□□□□□ -1.99
CDC48YDL126C YBR016WP38216 128 aa2.62□□□□□ -1.99
CDC48YDL126C YHR086W-AQ3E746 53 aa2.54□□□□□ -2
CDC48YDL126C YCR108CQ3E819 63 aa2.54□□□□□ -2
CDC48YDL126C MDN1Q12019 4910 aaKnown RBP2.53□□□□□ -2
CDC48YDL126C YBL044WP38194 122 aa2.52□□□□□ -2.01
CDC48YDL126C RPL37AP49166 88 aaKnown RBP2.49□□□□□ -2.01
CDC48YDL126C YOR072W-BQ3E832 53 aa2.48□□□□□ -2.01
CDC48YDL126C HHY1P39982 102 aa2.43□□□□□ -2.02
CDC48YDL126C YML054C-AQ3E809 52 aa2.32□□□□□ -2.04
CDC48YDL126C Q0017Q9ZZX8 53 aa2.27□□□□□ -2.05
CDC48YDL126C YOL164W-AQ3E7A5 60 aa2.09□□□□□ -2.08
CDC48YDL126C RPS29AP41057 56 aaKnown RBP2□□□□□ -2.09
CDC48YDL126C YHR050W-AQ05451 56 aa1.98□□□□□ -2.09
CDC48YDL126C YLR157W-EP0CF00 54 aa1.97□□□□□ -2.09
CDC48YDL126C RPS29BP41058 56 aaKnown RBP1.83□□□□□ -2.12
Retrieved 63 of 5,963 RNA–protein pairs in 42.9 ms