RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C URA2P07259 2214 aaKnown RBP1.28□□□□□ -2.2
RRP42YDL111C MRX7P53869 86 aa1.27□□□□□ -2.21
RRP42YDL111C HOR7Q05827 59 aa1.27□□□□□ -2.21
RRP42YDL111C YDR010CQ12426 110 aa1.27□□□□□ -2.21
RRP42YDL111C YBL039W-BP0C268 59 aa1.26□□□□□ -2.21
RRP42YDL111C YLR157W-EP0CF00 54 aa1.26□□□□□ -2.21
RRP42YDL111C RPC10P40422 70 aa1.26□□□□□ -2.21
RRP42YDL111C YGR025WP53216 100 aa1.26□□□□□ -2.21
RRP42YDL111C YIL156W-BQ2V2P4 73 aa1.26□□□□□ -2.21
RRP42YDL111C YJL133C-AQ3E7A3 74 aa1.26□□□□□ -2.21
RRP42YDL111C YJL127C-BQ3E828 52 aa1.26□□□□□ -2.21
RRP42YDL111C DDR2P89113 61 aa1.25□□□□□ -2.21
RRP42YDL111C YBR230W-AQ3E762 66 aa1.25□□□□□ -2.21
RRP42YDL111C YOL097W-AQ3E7Y9 61 aa1.24□□□□□ -2.21
RRP42YDL111C YLR255CO13574 117 aa1.23□□□□□ -2.21
RRP42YDL111C AUA1P32450 94 aa1.23□□□□□ -2.21
RRP42YDL111C YDR210WQ03482 75 aa1.23□□□□□ -2.21
RRP42YDL111C SGF11Q03067 99 aa1.22□□□□□ -2.21
RRP42YDL111C YBR072C-AQ3E794 53 aa1.21□□□□□ -2.22
RRP42YDL111C Q0032Q9ZZX7 96 aa1.21□□□□□ -2.22
RRP42YDL111C YBR201C-AQ2V2Q3 67 aa1.2□□□□□ -2.22
RRP42YDL111C TAO3P40468 2376 aa1.2□□□□□ -2.22
RRP42YDL111C GCN1P33892 2672 aaKnown RBP1.19□□□□□ -2.22
RRP42YDL111C YGR146C-AQ8TGT9 53 aa1.19□□□□□ -2.22
RRP42YDL111C YOR394C-AQ8TGJ0 55 aa1.16□□□□□ -2.22
RRP42YDL111C YHR073W-AP0C5N7 58 aa1.15□□□□□ -2.23
RRP42YDL111C OLI1P61829 76 aa1.15□□□□□ -2.23
RRP42YDL111C YOR316C-AQ3E806 69 aa1.15□□□□□ -2.23
RRP42YDL111C YLL066W-BQ8TGJ7 56 aa1.14□□□□□ -2.23
RRP42YDL111C COX7P10174 60 aa1.13□□□□□ -2.23
RRP42YDL111C MEC1P38111 2368 aa1.13□□□□□ -2.23
RRP42YDL111C CSF1Q12150 2958 aa1.13□□□□□ -2.23
RRP42YDL111C FMP27Q06179 2628 aa1.12□□□□□ -2.23
RRP42YDL111C YCR108CQ3E819 63 aa1.12□□□□□ -2.23
RRP42YDL111C PRP8P33334 2413 aaKnown RBP1.12□□□□□ -2.23
RRP42YDL111C UTP20P35194 2493 aaKnown RBP1.11□□□□□ -2.23
RRP42YDL111C IRA2P19158 3079 aa1.11□□□□□ -2.23
RRP42YDL111C YBL044WP38194 122 aa1.1□□□□□ -2.23
RRP42YDL111C YBR016WP38216 128 aa1.1□□□□□ -2.23
RRP42YDL111C YOL164W-AQ3E7A5 60 aa1.1□□□□□ -2.23
RRP42YDL111C YDR034C-AP0C289 58 aa1.08□□□□□ -2.24
RRP42YDL111C Q0297Q9ZZV8 51 aa1.08□□□□□ -2.24
RRP42YDL111C TOM1Q03280 3268 aa1.08□□□□□ -2.24
RRP42YDL111C NUM1Q00402 2748 aa1.05□□□□□ -2.24
RRP42YDL111C YOR072W-BQ3E832 53 aa1.05□□□□□ -2.24
RRP42YDL111C YDR034W-BQ6Q5X2 51 aa1.05□□□□□ -2.24
RRP42YDL111C VPS13Q07878 3144 aa1.04□□□□□ -2.24
RRP42YDL111C YPR117WQ06116 2489 aa1.04□□□□□ -2.24
RRP42YDL111C TOR2P32600 2474 aaKnown RBP1.03□□□□□ -2.25
RRP42YDL111C IRA1P18963 3092 aa1.02□□□□□ -2.25
RRP42YDL111C RPS29BP41058 56 aaKnown RBP1.01□□□□□ -2.25
RRP42YDL111C YML054C-AQ3E809 52 aa1□□□□□ -2.25
RRP42YDL111C TEL1P38110 2787 aa1□□□□□ -2.25
RRP42YDL111C TOR1P35169 2470 aa0.97□□□□□ -2.25
RRP42YDL111C TRA1P38811 3744 aa0.96□□□□□ -2.26
RRP42YDL111C Q0017Q9ZZX8 53 aa0.95□□□□□ -2.26
RRP42YDL111C YBR056W-AI2HB52 66 aa0.94□□□□□ -2.26
RRP42YDL111C YHR050W-AQ05451 56 aa0.83□□□□□ -2.28
RRP42YDL111C RPS29AP41057 56 aaKnown RBP0.8□□□□□ -2.28
RRP42YDL111C DYN1P36022 4092 aa0.76□□□□□ -2.29
RRP42YDL111C CUP1-1P0CX80 61 aa0.72□□□□□ -2.29
RRP42YDL111C CUP1-2P0CX81 61 aa0.72□□□□□ -2.29
RRP42YDL111C MDN1Q12019 4910 aaKnown RBP0.65□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 16.9 ms