RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W RPS27BP38711 82 aa2.35□□□□□ -2.03
KIN28YDL108W YLR342W-AQ3E810 57 aa2.35□□□□□ -2.03
KIN28YDL108W SIP18P50263 79 aa2.31□□□□□ -2.04
KIN28YDL108W TOM7P53507 60 aa2.31□□□□□ -2.04
KIN28YDL108W RPL43AP0CX25 92 aaKnown RBP2.3□□□□□ -2.04
KIN28YDL108W RPL43BP0CX26 92 aa2.3□□□□□ -2.04
KIN28YDL108W YBR016WP38216 128 aa2.28□□□□□ -2.04
KIN28YDL108W HUA1P40325 198 aa2.28□□□□□ -2.04
KIN28YDL108W YJL133C-AQ3E7A3 74 aa2.27□□□□□ -2.05
KIN28YDL108W YCR108CQ3E819 63 aa2.27□□□□□ -2.05
KIN28YDL108W YGR146C-AQ8TGT9 53 aa2.25□□□□□ -2.05
KIN28YDL108W RPL37BP51402 88 aaKnown RBP2.24□□□□□ -2.05
KIN28YDL108W YLL006W-AQ3E814 58 aa2.22□□□□□ -2.05
KIN28YDL108W FLO1P32768 1537 aa2.22□□□□□ -2.05
KIN28YDL108W DDR2P89113 61 aa2.21□□□□□ -2.06
KIN28YDL108W RPL29P05747 59 aaPredicted RBP2.2□□□□□ -2.06
KIN28YDL108W YBL044WP38194 122 aa2.2□□□□□ -2.06
KIN28YDL108W YGL258W-AQ3E740 77 aa2.2□□□□□ -2.06
KIN28YDL108W YOL164W-AQ3E7A5 60 aa2.1□□□□□ -2.07
KIN28YDL108W YOR316C-AQ3E806 69 aa2.1□□□□□ -2.07
KIN28YDL108W YLR157W-EP0CF00 54 aa2.09□□□□□ -2.07
KIN28YDL108W YJL127C-BQ3E828 52 aa2.07□□□□□ -2.08
KIN28YDL108W RPL37AP49166 88 aaKnown RBP2.02□□□□□ -2.09
KIN28YDL108W YDR524C-BQ3E6R4 66 aa2.01□□□□□ -2.09
KIN28YDL108W YHR073W-AP0C5N7 58 aa1.96□□□□□ -2.1
KIN28YDL108W YOR072W-BQ3E832 53 aa1.96□□□□□ -2.1
KIN28YDL108W NCE101Q02820 53 aa1.95□□□□□ -2.1
KIN28YDL108W PMP3P87284 55 aa1.91□□□□□ -2.1
KIN28YDL108W HOR7Q05827 59 aa1.91□□□□□ -2.1
KIN28YDL108W TAO3P40468 2376 aa1.9□□□□□ -2.11
KIN28YDL108W YDR034C-AP0C289 58 aa1.84□□□□□ -2.11
KIN28YDL108W RPS29BP41058 56 aaKnown RBP1.81□□□□□ -2.12
KIN28YDL108W PRP8P33334 2413 aaKnown RBP1.67□□□□□ -2.14
KIN28YDL108W RPS29AP41057 56 aaKnown RBP1.67□□□□□ -2.14
KIN28YDL108W MEC1P38111 2368 aa1.63□□□□□ -2.15
KIN28YDL108W YMR105W-AQ8TGS8 64 aa1.61□□□□□ -2.15
KIN28YDL108W TRA1P38811 3744 aa1.54□□□□□ -2.16
KIN28YDL108W YML054C-AQ3E809 52 aa1.5□□□□□ -2.17
KIN28YDL108W YLL066W-BQ8TGJ7 56 aa1.47□□□□□ -2.17
KIN28YDL108W TOR1P35169 2470 aa1.47□□□□□ -2.17
KIN28YDL108W YHR050W-AQ05451 56 aa1.46□□□□□ -2.18
KIN28YDL108W RPL39P04650 51 aa1.45□□□□□ -2.18
KIN28YDL108W Q0017Q9ZZX8 53 aa1.44□□□□□ -2.18
KIN28YDL108W UTP20P35194 2493 aaKnown RBP1.4□□□□□ -2.19
KIN28YDL108W DYN1P36022 4092 aa1.39□□□□□ -2.19
KIN28YDL108W CSF1Q12150 2958 aa1.38□□□□□ -2.19
KIN28YDL108W YIL046W-AQ3E7Z4 54 aa1.28□□□□□ -2.2
KIN28YDL108W TOR2P32600 2474 aaKnown RBP1.26□□□□□ -2.21
KIN28YDL108W IRA1P18963 3092 aa1.24□□□□□ -2.21
KIN28YDL108W IRA2P19158 3079 aa1.24□□□□□ -2.21
KIN28YDL108W GCN1P33892 2672 aaKnown RBP1.21□□□□□ -2.22
KIN28YDL108W VPS13Q07878 3144 aa1.15□□□□□ -2.23
KIN28YDL108W FMP27Q06179 2628 aa1.15□□□□□ -2.23
KIN28YDL108W NUM1Q00402 2748 aa1.14□□□□□ -2.23
KIN28YDL108W YPR117WQ06116 2489 aa1.07□□□□□ -2.24
KIN28YDL108W TEL1P38110 2787 aa1.05□□□□□ -2.24
KIN28YDL108W TOM1Q03280 3268 aa1.03□□□□□ -2.24
KIN28YDL108W CUP1-1P0CX80 61 aa0.9□□□□□ -2.27
KIN28YDL108W CUP1-2P0CX81 61 aa0.9□□□□□ -2.27
KIN28YDL108W Q0297Q9ZZV8 51 aa0.73□□□□□ -2.29
KIN28YDL108W MDN1Q12019 4910 aaKnown RBP0.6□□□□□ -2.31
KIN28YDL108W YDR034W-BQ6Q5X2 51 aa0.3□□□□□ -2.36
KIN28YDL108W YBR056W-AI2HB52 66 aa0.26□□□□□ -2.37
Retrieved 63 of 5,963 RNA–protein pairs in 9.5 ms