RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeastyeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB2YDL084W POL2P21951 2222 aaKnown RBP3.52□□□□□ -1.85
SUB2YDL084W PMP3P87284 55 aa3.51□□□□□ -1.85
SUB2YDL084W RPS27AP35997 82 aaKnown RBP3.5□□□□□ -1.85
SUB2YDL084W URA2P07259 2214 aaKnown RBP3.47□□□□□ -1.85
SUB2YDL084W YNL146C-AQ3E7Z1 64 aa3.46□□□□□ -1.85
SUB2YDL084W YGR146C-AQ8TGT9 53 aa3.45□□□□□ -1.86
SUB2YDL084W RPL43AP0CX25 92 aaKnown RBP3.44□□□□□ -1.86
SUB2YDL084W RPL43BP0CX26 92 aa3.44□□□□□ -1.86
SUB2YDL084W RPL37BP51402 88 aaKnown RBP3.44□□□□□ -1.86
SUB2YDL084W RPS27BP38711 82 aa3.43□□□□□ -1.86
SUB2YDL084W YCR108CQ3E819 63 aa3.43□□□□□ -1.86
SUB2YDL084W RPC10P40422 70 aa3.42□□□□□ -1.86
SUB2YDL084W HOR7Q05827 59 aa3.41□□□□□ -1.86
SUB2YDL084W YBL044WP38194 122 aa3.4□□□□□ -1.87
SUB2YDL084W YGL260WP53056 76 aa3.33□□□□□ -1.88
SUB2YDL084W YBR072C-AQ3E794 53 aa3.33□□□□□ -1.88
SUB2YDL084W YMR230W-AQ3E7B5 62 aa3.33□□□□□ -1.88
SUB2YDL084W YBR016WP38216 128 aa3.32□□□□□ -1.88
SUB2YDL084W YMR105W-AQ8TGS8 64 aa3.32□□□□□ -1.88
SUB2YDL084W YOR316C-AQ3E806 69 aa3.31□□□□□ -1.88
SUB2YDL084W HHY1P39982 102 aa3.28□□□□□ -1.88
SUB2YDL084W YHR073W-AP0C5N7 58 aa3.23□□□□□ -1.89
SUB2YDL084W YHR212W-AP0CX91 67 aa3.22□□□□□ -1.89
SUB2YDL084W HFA1P32874 2273 aa3.21□□□□□ -1.89
SUB2YDL084W RPL39P04650 51 aa3.2□□□□□ -1.9
SUB2YDL084W YHR086W-AQ3E746 53 aa3.19□□□□□ -1.9
SUB2YDL084W RPL37AP49166 88 aaKnown RBP3.09□□□□□ -1.91
SUB2YDL084W YOR072W-BQ3E832 53 aa3.08□□□□□ -1.92
SUB2YDL084W YIL046W-AQ3E7Z4 54 aa3.06□□□□□ -1.92
SUB2YDL084W YDR034C-AP0C289 58 aa3.02□□□□□ -1.93
SUB2YDL084W YDR524C-BQ3E6R4 66 aa3.02□□□□□ -1.93
SUB2YDL084W TAO3P40468 2376 aa2.91□□□□□ -1.94
SUB2YDL084W YLL066W-BQ8TGJ7 56 aa2.91□□□□□ -1.94
SUB2YDL084W YOL164W-AQ3E7A5 60 aa2.9□□□□□ -1.95
SUB2YDL084W MEC1P38111 2368 aa2.88□□□□□ -1.95
SUB2YDL084W YLR157W-EP0CF00 54 aa2.75□□□□□ -1.97
SUB2YDL084W PRP8P33334 2413 aaKnown RBP2.66□□□□□ -1.98
SUB2YDL084W YML054C-AQ3E809 52 aa2.62□□□□□ -1.99
SUB2YDL084W IRA2P19158 3079 aa2.53□□□□□ -2
SUB2YDL084W GCN1P33892 2672 aaKnown RBP2.51□□□□□ -2.01
SUB2YDL084W Q0017Q9ZZX8 53 aa2.47□□□□□ -2.01
SUB2YDL084W UTP20P35194 2493 aaKnown RBP2.42□□□□□ -2.02
SUB2YDL084W CSF1Q12150 2958 aa2.42□□□□□ -2.02
SUB2YDL084W TRA1P38811 3744 aa2.41□□□□□ -2.02
SUB2YDL084W RPS29AP41057 56 aaKnown RBP2.41□□□□□ -2.02
SUB2YDL084W VPS13Q07878 3144 aa2.4□□□□□ -2.02
SUB2YDL084W RPS29BP41058 56 aaKnown RBP2.4□□□□□ -2.03
SUB2YDL084W YHR050W-AQ05451 56 aa2.37□□□□□ -2.03
SUB2YDL084W Q0297Q9ZZV8 51 aa2.35□□□□□ -2.03
SUB2YDL084W FMP27Q06179 2628 aa2.33□□□□□ -2.04
SUB2YDL084W TOM1Q03280 3268 aa2.32□□□□□ -2.04
SUB2YDL084W IRA1P18963 3092 aa2.22□□□□□ -2.05
SUB2YDL084W TOR2P32600 2474 aaKnown RBP2.2□□□□□ -2.06
SUB2YDL084W TOR1P35169 2470 aa2.19□□□□□ -2.06
SUB2YDL084W NUM1Q00402 2748 aa2.17□□□□□ -2.06
SUB2YDL084W DYN1P36022 4092 aa2.17□□□□□ -2.06
SUB2YDL084W YPR117WQ06116 2489 aa2.12□□□□□ -2.07
SUB2YDL084W TEL1P38110 2787 aa2.09□□□□□ -2.07
SUB2YDL084W YBR056W-AI2HB52 66 aa1.82□□□□□ -2.12
SUB2YDL084W YDR034W-BQ6Q5X2 51 aa1.8□□□□□ -2.12
SUB2YDL084W CUP1-1P0CX80 61 aa1.74□□□□□ -2.13
SUB2YDL084W CUP1-2P0CX81 61 aa1.74□□□□□ -2.13
SUB2YDL084W MDN1Q12019 4910 aaKnown RBP1.26□□□□□ -2.21
Retrieved 63 of 5,963 RNA–protein pairs in 8.3 ms