RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C YDR115WQ04598 105 aa0.7□□□□□ -2.3
VAM6YDL077C YHR007C-AQ07074 71 aa0.7□□□□□ -2.3
VAM6YDL077C YBR201C-AQ2V2Q3 67 aa0.7□□□□□ -2.3
VAM6YDL077C YOR394C-AQ8TGJ0 55 aa0.7□□□□□ -2.3
VAM6YDL077C YJR085CP47131 105 aaKnown RBP0.69□□□□□ -2.3
VAM6YDL077C YOL085CQ99345 113 aa0.69□□□□□ -2.3
VAM6YDL077C YBR072C-AQ3E794 53 aa0.69□□□□□ -2.3
VAM6YDL077C YPR195CQ06594 109 aa0.69□□□□□ -2.3
VAM6YDL077C SEN1Q00416 2231 aaKnown RBP0.68□□□□□ -2.3
VAM6YDL077C GIS2P53849 153 aaKnown RBP RIP-Chip data0.68□□□□□ -2.3not detected
VAM6YDL077C YHR032W-AP0C5N6 59 aa0.68□□□□□ -2.3
VAM6YDL077C YBR016WP38216 128 aa0.67□□□□□ -2.3
VAM6YDL077C YLL066W-BQ8TGJ7 56 aa0.67□□□□□ -2.3
VAM6YDL077C TAR1Q8TGM6 124 aa0.67□□□□□ -2.3
VAM6YDL077C BRR2P32639 2163 aaKnown RBP0.66□□□□□ -2.3
VAM6YDL077C YER078W-AQ3E7A2 54 aa0.66□□□□□ -2.3
VAM6YDL077C YJR128WP47162 119 aa0.66□□□□□ -2.3
VAM6YDL077C YCL042WP25572 119 aa0.65□□□□□ -2.31
VAM6YDL077C RPL37AP49166 88 aaKnown RBP0.65□□□□□ -2.31
VAM6YDL077C YHR212W-AP0CX91 67 aa0.65□□□□□ -2.31
VAM6YDL077C YJL144WP47009 104 aa0.65□□□□□ -2.31
VAM6YDL077C CMC4Q3E7A9 73 aa0.65□□□□□ -2.31
VAM6YDL077C YOR072W-BQ3E832 53 aa0.64□□□□□ -2.31
VAM6YDL077C ACC1Q00955 2233 aaKnown RBP0.64□□□□□ -2.31
VAM6YDL077C YDR034C-AP0C289 58 aa0.63□□□□□ -2.31
VAM6YDL077C YCR108CQ3E819 63 aa0.63□□□□□ -2.31
VAM6YDL077C BPH1P25356 2167 aa0.63□□□□□ -2.31
VAM6YDL077C YAL067W-AQ8TGK6 75 aa0.63□□□□□ -2.31
VAM6YDL077C Q0297Q9ZZV8 51 aa0.63□□□□□ -2.31
VAM6YDL077C POL2P21951 2222 aaKnown RBP0.62□□□□□ -2.31
VAM6YDL077C HHY1P39982 102 aa0.62□□□□□ -2.31
VAM6YDL077C YML054C-AQ3E809 52 aa0.62□□□□□ -2.31
VAM6YDL077C YBL044WP38194 122 aa0.61□□□□□ -2.31
VAM6YDL077C FAB1P34756 2278 aa0.61□□□□□ -2.31
VAM6YDL077C Q0017Q9ZZX8 53 aa0.6□□□□□ -2.31
VAM6YDL077C YMR230W-AQ3E7B5 62 aa0.6□□□□□ -2.31
VAM6YDL077C YGL260WP53056 76 aa0.59□□□□□ -2.31
VAM6YDL077C YDR034W-BQ6Q5X2 51 aa0.57□□□□□ -2.32
VAM6YDL077C URA2P07259 2214 aaKnown RBP0.57□□□□□ -2.32
VAM6YDL077C RPS29AP41057 56 aaKnown RBP0.54□□□□□ -2.32
VAM6YDL077C HFA1P32874 2273 aa0.54□□□□□ -2.32
VAM6YDL077C YPR117WQ06116 2489 aa0.53□□□□□ -2.32
VAM6YDL077C YHR050W-AQ05451 56 aa0.52□□□□□ -2.33
VAM6YDL077C YHR086W-AQ3E746 53 aa0.52□□□□□ -2.33
VAM6YDL077C DYN1P36022 4092 aa0.51□□□□□ -2.33
VAM6YDL077C IRA2P19158 3079 aa0.51□□□□□ -2.33
VAM6YDL077C CSF1Q12150 2958 aa0.49□□□□□ -2.33
VAM6YDL077C RPS29BP41058 56 aaKnown RBP0.48□□□□□ -2.33
VAM6YDL077C YOL164W-AQ3E7A5 60 aa0.48□□□□□ -2.33
VAM6YDL077C TRA1P38811 3744 aa0.46□□□□□ -2.34
VAM6YDL077C YLR157W-EP0CF00 54 aa0.46□□□□□ -2.34
VAM6YDL077C TAO3P40468 2376 aa0.45□□□□□ -2.34
VAM6YDL077C MEC1P38111 2368 aa0.44□□□□□ -2.34
VAM6YDL077C VPS13Q07878 3144 aa0.43□□□□□ -2.34
VAM6YDL077C GCN1P33892 2672 aaKnown RBP0.42□□□□□ -2.34
VAM6YDL077C TOR1P35169 2470 aa0.41□□□□□ -2.34
VAM6YDL077C FMP27Q06179 2628 aa0.41□□□□□ -2.34
VAM6YDL077C IRA1P18963 3092 aa0.4□□□□□ -2.35
VAM6YDL077C TOM1Q03280 3268 aa0.37□□□□□ -2.35
VAM6YDL077C TEL1P38110 2787 aa0.36□□□□□ -2.35
VAM6YDL077C PRP8P33334 2413 aaKnown RBP0.36□□□□□ -2.35
VAM6YDL077C UTP20P35194 2493 aaKnown RBP0.35□□□□□ -2.35
VAM6YDL077C TOR2P32600 2474 aaKnown RBP0.35□□□□□ -2.35
Retrieved 63 of 5,963 RNA–protein pairs in 11.5 ms