RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C YNL146C-AQ3E7Z1 64 aa2.3□□□□□ -2.04
PRP11YDL043C BEM2P39960 2167 aaKnown RBP2.29□□□□□ -2.04
PRP11YDL043C RPC10P40422 70 aa2.29□□□□□ -2.04
PRP11YDL043C HOR7Q05827 59 aa2.28□□□□□ -2.04
PRP11YDL043C YGR146C-AQ8TGT9 53 aa2.28□□□□□ -2.04
PRP11YDL043C SEN1Q00416 2231 aaKnown RBP2.27□□□□□ -2.05
PRP11YDL043C SEC16P48415 2195 aaKnown RBP2.27□□□□□ -2.05
PRP11YDL043C ACC1Q00955 2233 aaKnown RBP2.26□□□□□ -2.05
PRP11YDL043C RPS27AP35997 82 aaKnown RBP2.26□□□□□ -2.05
PRP11YDL043C RPS27BP38711 82 aa2.26□□□□□ -2.05
PRP11YDL043C YHR086W-AQ3E746 53 aa2.25□□□□□ -2.05
PRP11YDL043C RPL43AP0CX25 92 aaKnown RBP2.24□□□□□ -2.05
PRP11YDL043C RPL43BP0CX26 92 aa2.24□□□□□ -2.05
PRP11YDL043C YCR108CQ3E819 63 aa2.24□□□□□ -2.05
PRP11YDL043C HHY1P39982 102 aa2.22□□□□□ -2.05
PRP11YDL043C RPL37BP51402 88 aaKnown RBP2.22□□□□□ -2.05
PRP11YDL043C YBR072C-AQ3E794 53 aa2.22□□□□□ -2.05
PRP11YDL043C YMR105W-AQ8TGS8 64 aa2.21□□□□□ -2.06
PRP11YDL043C RPL39P04650 51 aa2.2□□□□□ -2.06
PRP11YDL043C YOR316C-AQ3E806 69 aa2.2□□□□□ -2.06
PRP11YDL043C YHR073W-AP0C5N7 58 aa2.14□□□□□ -2.07
PRP11YDL043C YBR016WP38216 128 aa2.14□□□□□ -2.07
PRP11YDL043C POL2P21951 2222 aaKnown RBP2.13□□□□□ -2.07
PRP11YDL043C URA2P07259 2214 aaKnown RBP2.12□□□□□ -2.07
PRP11YDL043C YOR072W-BQ3E832 53 aa2.12□□□□□ -2.07
PRP11YDL043C YHR212W-AP0CX91 67 aa2.1□□□□□ -2.07
PRP11YDL043C YDR034C-AP0C289 58 aa2.05□□□□□ -2.08
PRP11YDL043C RPL37AP49166 88 aaKnown RBP2.03□□□□□ -2.08
PRP11YDL043C YDR524C-BQ3E6R4 66 aa2.02□□□□□ -2.09
PRP11YDL043C YIL046W-AQ3E7Z4 54 aa2□□□□□ -2.09
PRP11YDL043C YOL164W-AQ3E7A5 60 aa1.99□□□□□ -2.09
PRP11YDL043C HFA1P32874 2273 aa1.92□□□□□ -2.1
PRP11YDL043C YLL066W-BQ8TGJ7 56 aa1.9□□□□□ -2.11
PRP11YDL043C YLR157W-EP0CF00 54 aa1.85□□□□□ -2.11
PRP11YDL043C YML054C-AQ3E809 52 aa1.85□□□□□ -2.11
PRP11YDL043C TAO3P40468 2376 aa1.74□□□□□ -2.13
PRP11YDL043C MEC1P38111 2368 aa1.74□□□□□ -2.13
PRP11YDL043C Q0017Q9ZZX8 53 aa1.72□□□□□ -2.13
PRP11YDL043C YHR050W-AQ05451 56 aa1.66□□□□□ -2.14
PRP11YDL043C Q0297Q9ZZV8 51 aa1.65□□□□□ -2.15
PRP11YDL043C RPS29BP41058 56 aaKnown RBP1.62□□□□□ -2.15
PRP11YDL043C RPS29AP41057 56 aaKnown RBP1.6□□□□□ -2.15
PRP11YDL043C PRP8P33334 2413 aaKnown RBP1.58□□□□□ -2.16
PRP11YDL043C IRA2P19158 3079 aa1.52□□□□□ -2.17
PRP11YDL043C GCN1P33892 2672 aaKnown RBP1.47□□□□□ -2.17
PRP11YDL043C VPS13Q07878 3144 aa1.44□□□□□ -2.18
PRP11YDL043C UTP20P35194 2493 aaKnown RBP1.43□□□□□ -2.18
PRP11YDL043C CSF1Q12150 2958 aa1.42□□□□□ -2.18
PRP11YDL043C FMP27Q06179 2628 aa1.41□□□□□ -2.18
PRP11YDL043C TOM1Q03280 3268 aa1.36□□□□□ -2.19
PRP11YDL043C TRA1P38811 3744 aa1.35□□□□□ -2.19
PRP11YDL043C TOR2P32600 2474 aaKnown RBP1.32□□□□□ -2.2
PRP11YDL043C TOR1P35169 2470 aa1.32□□□□□ -2.2
PRP11YDL043C IRA1P18963 3092 aa1.31□□□□□ -2.2
PRP11YDL043C NUM1Q00402 2748 aa1.26□□□□□ -2.21
PRP11YDL043C YPR117WQ06116 2489 aa1.25□□□□□ -2.21
PRP11YDL043C YDR034W-BQ6Q5X2 51 aa1.24□□□□□ -2.21
PRP11YDL043C TEL1P38110 2787 aa1.21□□□□□ -2.22
PRP11YDL043C YBR056W-AI2HB52 66 aa1.21□□□□□ -2.22
PRP11YDL043C DYN1P36022 4092 aa1.2□□□□□ -2.22
PRP11YDL043C CUP1-1P0CX80 61 aa1.17□□□□□ -2.22
PRP11YDL043C CUP1-2P0CX81 61 aa1.17□□□□□ -2.22
PRP11YDL043C MDN1Q12019 4910 aaKnown RBP0.68□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 97.6 ms