RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W YOL085CQ99345 113 aa4.11□□□□□ -1.75
SLX5YDL013W YDL012CQ12489 107 aa4.11□□□□□ -1.75
SLX5YDL013W YCL042WP25572 119 aa4.09□□□□□ -1.75
SLX5YDL013W RPL39P04650 51 aa4.08□□□□□ -1.76
SLX5YDL013W Q0297Q9ZZV8 51 aa4.08□□□□□ -1.76
SLX5YDL013W MVB12P42939 101 aa4.07□□□□□ -1.76
SLX5YDL013W YHR213W-BQ8TGK1 99 aa4.07□□□□□ -1.76
SLX5YDL013W YBR200W-AQ3E755 54 aa4.07□□□□□ -1.76
SLX5YDL013W AUA1P32450 94 aa4.05□□□□□ -1.76
SLX5YDL013W YGR025WP53216 100 aa4.05□□□□□ -1.76
SLX5YDL013W YGR240C-AQ3E786 66 aa4.05□□□□□ -1.76
SLX5YDL013W YLR255CO13574 117 aa4.05□□□□□ -1.76
SLX5YDL013W YJL133C-AQ3E7A3 74 aa4.04□□□□□ -1.76
SLX5YDL013W YJL144WP47009 104 aa4.02□□□□□ -1.77
SLX5YDL013W YMR105W-AQ8TGS8 64 aa4.02□□□□□ -1.77
SLX5YDL013W YOR072WQ08486 104 aa4.01□□□□□ -1.77
SLX5YDL013W YOR011W-AQ3E807 68 aa4.01□□□□□ -1.77
SLX5YDL013W URA2P07259 2214 aaKnown RBP4□□□□□ -1.77
SLX5YDL013W TAR1Q8TGM6 124 aa3.98□□□□□ -1.77
SLX5YDL013W YHR007C-AQ07074 71 aa3.98□□□□□ -1.77
SLX5YDL013W RPL29P05747 59 aaPredicted RBP3.96□□□□□ -1.77
SLX5YDL013W PMP3P87284 55 aa3.96□□□□□ -1.78
SLX5YDL013W YAR064WP39563 99 aa3.94□□□□□ -1.78
SLX5YDL013W COX7P10174 60 aa3.93□□□□□ -1.78
SLX5YDL013W UTP20P35194 2493 aaKnown RBP3.92□□□□□ -1.78
SLX5YDL013W YLR307C-AQ3E825 87 aa3.92□□□□□ -1.78
SLX5YDL013W DYN1P36022 4092 aa3.9□□□□□ -1.78
SLX5YDL013W YJR128WP47162 119 aa3.9□□□□□ -1.79
SLX5YDL013W YBR230W-AQ3E762 66 aa3.9□□□□□ -1.79
SLX5YDL013W YOR394C-AQ8TGJ0 55 aa3.9□□□□□ -1.79
SLX5YDL013W DDR2P89113 61 aa3.88□□□□□ -1.79
SLX5YDL013W YJL127C-BQ3E828 52 aa3.88□□□□□ -1.79
SLX5YDL013W LCL1Q02786 101 aa3.86□□□□□ -1.79
SLX5YDL013W YNL146C-AQ3E7Z1 64 aa3.86□□□□□ -1.79
SLX5YDL013W GIS2P53849 153 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SLX5YDL013W HOR7Q05827 59 aa3.79□□□□□ -1.8
SLX5YDL013W OLI1P61829 76 aa3.79□□□□□ -1.8
SLX5YDL013W YJL009WP47078 108 aa3.78□□□□□ -1.8
SLX5YDL013W RDS3Q06835 107 aaPredicted RBP3.76□□□□□ -1.81
SLX5YDL013W YHR212W-AP0CX91 67 aa3.75□□□□□ -1.81
SLX5YDL013W YGR146C-AQ8TGT9 53 aa3.74□□□□□ -1.81
SLX5YDL013W RPC10P40422 70 aa3.73□□□□□ -1.81
SLX5YDL013W YCR108CQ3E819 63 aa3.73□□□□□ -1.81
SLX5YDL013W YBL044WP38194 122 aa3.71□□□□□ -1.82
SLX5YDL013W RPL37BP51402 88 aaKnown RBP3.69□□□□□ -1.82
SLX5YDL013W YBR016WP38216 128 aa3.59□□□□□ -1.83
SLX5YDL013W MDN1Q12019 4910 aaKnown RBP3.57□□□□□ -1.84
SLX5YDL013W YOR316C-AQ3E806 69 aa3.56□□□□□ -1.84
SLX5YDL013W YBR072C-AQ3E794 53 aa3.51□□□□□ -1.85
SLX5YDL013W YHR073W-AP0C5N7 58 aa3.5□□□□□ -1.85
SLX5YDL013W HHY1P39982 102 aa3.46□□□□□ -1.86
SLX5YDL013W YLL066W-BQ8TGJ7 56 aa3.39□□□□□ -1.87
SLX5YDL013W YHR086W-AQ3E746 53 aa3.35□□□□□ -1.87
SLX5YDL013W RPL37AP49166 88 aaKnown RBP3.33□□□□□ -1.88
SLX5YDL013W YOR072W-BQ3E832 53 aa3.3□□□□□ -1.88
SLX5YDL013W YDR034C-AP0C289 58 aa3.28□□□□□ -1.88
SLX5YDL013W YOL164W-AQ3E7A5 60 aa3.16□□□□□ -1.9
SLX5YDL013W YML054C-AQ3E809 52 aa2.91□□□□□ -1.94
SLX5YDL013W YLR157W-EP0CF00 54 aa2.9□□□□□ -1.94
SLX5YDL013W Q0017Q9ZZX8 53 aa2.72□□□□□ -1.97
SLX5YDL013W YHR050W-AQ05451 56 aa2.53□□□□□ -2
SLX5YDL013W RPS29AP41057 56 aaKnown RBP2.5□□□□□ -2.01
SLX5YDL013W RPS29BP41058 56 aaKnown RBP2.46□□□□□ -2.02
Retrieved 63 of 5,963 RNA–protein pairs in 46.6 ms