RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W YKL018C-AQ3E7A7 99 aa1.17□□□□□ -2.22
SWD3YBR175W YPR108W-AQ3E7B3 70 aa1.17□□□□□ -2.22
SWD3YBR175W VMA9Q3E7B6 73 aa1.17□□□□□ -2.22
SWD3YBR175W YBR032WP38223 100 aa1.16□□□□□ -2.22
SWD3YBR175W YJR107C-AP0CT86 78 aa1.15□□□□□ -2.23
SWD3YBR175W YOL164W-AQ3E7A5 60 aa1.15□□□□□ -2.23
SWD3YBR175W HUB1Q6Q546 73 aa1.15□□□□□ -2.23
SWD3YBR175W YDR246W-AQ3E763 66 aa1.14□□□□□ -2.23
SWD3YBR175W EDC1P53080 175 aaPredicted RBP1.13□□□□□ -2.23
SWD3YBR175W YDR182W-AQ3E796 67 aa1.13□□□□□ -2.23
SWD3YBR175W YLR146W-AQ2V2P1 62 aa1.1□□□□□ -2.23
SWD3YBR175W YIL134C-AQ45U18 67 aa1.09□□□□□ -2.23
SWD3YBR175W RPS30AP0CX33 63 aaKnown RBP1.07□□□□□ -2.24
SWD3YBR175W RPS30BP0CX34 63 aaKnown RBP1.07□□□□□ -2.24
SWD3YBR175W YKL023C-AQ2V2P3 75 aa1.06□□□□□ -2.24
SWD3YBR175W YBL039W-BP0C268 59 aa1.05□□□□□ -2.24
SWD3YBR175W OLI1P61829 76 aa1.05□□□□□ -2.24
SWD3YBR175W YOR011W-AQ3E807 68 aa1.05□□□□□ -2.24
SWD3YBR175W YFR009W-AP0C5M9 85 aa1.03□□□□□ -2.24
SWD3YBR175W YBR016WP38216 128 aa1.03□□□□□ -2.24
SWD3YBR175W YBR200W-AQ3E755 54 aa1.03□□□□□ -2.24
SWD3YBR175W RPS29BP41058 56 aaKnown RBP1.02□□□□□ -2.25
SWD3YBR175W YGR025WP53216 100 aa1.01□□□□□ -2.25
SWD3YBR175W YOR394C-AQ8TGJ0 55 aa1.01□□□□□ -2.25
SWD3YBR175W YOL166W-AQ8TGJ1 51 aa1□□□□□ -2.25
SWD3YBR175W RPS27AP35997 82 aaKnown RBP0.99□□□□□ -2.25
SWD3YBR175W YMR001C-AQ8TGS9 76 aa0.99□□□□□ -2.25
SWD3YBR175W YLR157W-DP0CE99 70 aa0.97□□□□□ -2.25
SWD3YBR175W YBL044WP38194 122 aa0.95□□□□□ -2.26
SWD3YBR175W YBR230W-AQ3E762 66 aa0.93□□□□□ -2.26
SWD3YBR175W SIP18P50263 79 aa0.91□□□□□ -2.26
SWD3YBR175W RPS27BP38711 82 aa0.9□□□□□ -2.27
SWD3YBR175W YOR192C-CQ3E736 78 aa0.89□□□□□ -2.27
SWD3YBR175W YOR008C-AQ3E7B9 74 aa0.87□□□□□ -2.27
SWD3YBR175W TOS6P48560 102 aa0.82□□□□□ -2.28
SWD3YBR175W YCR108CQ3E819 63 aa0.82□□□□□ -2.28
SWD3YBR175W YGR146C-AQ8TGT9 53 aa0.81□□□□□ -2.28
SWD3YBR175W YPR010C-AA5Z2X5 72 aa0.8□□□□□ -2.28
SWD3YBR175W COA2Q3E823 68 aa0.79□□□□□ -2.28
SWD3YBR175W RPS29AP41057 56 aaKnown RBP0.76□□□□□ -2.29
SWD3YBR175W YOR072W-BQ3E832 53 aa0.68□□□□□ -2.3
SWD3YBR175W RPL39P04650 51 aa0.67□□□□□ -2.3
SWD3YBR175W YGL258W-AQ3E740 77 aa0.67□□□□□ -2.3
SWD3YBR175W YLL006W-AQ3E814 58 aa0.67□□□□□ -2.3
SWD3YBR175W HOR7Q05827 59 aa0.63□□□□□ -2.31
SWD3YBR175W COX9P07255 59 aa0.61□□□□□ -2.31
SWD3YBR175W NCE101Q02820 53 aa0.6□□□□□ -2.31
SWD3YBR175W YOR316C-AQ3E806 69 aa0.59□□□□□ -2.31
SWD3YBR175W YLR342W-AQ3E810 57 aa0.57□□□□□ -2.32
SWD3YBR175W SMX2P40204 77 aaKnown RBP0.56□□□□□ -2.32
SWD3YBR175W YJL133C-AQ3E7A3 74 aa0.56□□□□□ -2.32
SWD3YBR175W YMR105W-AQ8TGS8 64 aa0.56□□□□□ -2.32
SWD3YBR175W DDR2P89113 61 aa0.55□□□□□ -2.32
SWD3YBR175W YDR034C-AP0C289 58 aa0.53□□□□□ -2.32
SWD3YBR175W YHR050W-AQ05451 56 aa0.47□□□□□ -2.33
SWD3YBR175W TOM7P53507 60 aa0.46□□□□□ -2.34
SWD3YBR175W YLL066W-BQ8TGJ7 56 aa0.42□□□□□ -2.34
SWD3YBR175W RPL29P05747 59 aaPredicted RBP0.41□□□□□ -2.34
SWD3YBR175W YHR073W-AP0C5N7 58 aa0.4□□□□□ -2.35
SWD3YBR175W YJL127C-BQ3E828 52 aa0.39□□□□□ -2.35
SWD3YBR175W PMP3P87284 55 aa0.38□□□□□ -2.35
SWD3YBR175W YML054C-AQ3E809 52 aa0.33□□□□□ -2.36
SWD3YBR175W Q0017Q9ZZX8 53 aa0.32□□□□□ -2.36
Retrieved 63 of 5,963 RNA–protein pairs in 61.1 ms