RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W SHU1P38751 150 aa2.19□□□□□ -2.06
CKS1YBR135W YNL122CP53921 115 aaPredicted RBP2.18□□□□□ -2.06
CKS1YBR135W NOP10Q6Q547 58 aaPredicted RBP2.18□□□□□ -2.06
CKS1YBR135W YLR255CO13574 117 aa2.17□□□□□ -2.06
CKS1YBR135W YBL039W-BP0C268 59 aa2.17□□□□□ -2.06
CKS1YBR135W MVB12P42939 101 aa2.17□□□□□ -2.06
CKS1YBR135W YIL156W-BQ2V2P4 73 aa2.17□□□□□ -2.06
CKS1YBR135W YSY6P38374 65 aa2.13□□□□□ -2.07
CKS1YBR135W YLL006W-AQ3E814 58 aa2.13□□□□□ -2.07
CKS1YBR135W YDR246W-AQ3E763 66 aa2.12□□□□□ -2.07
CKS1YBR135W RPL29P05747 59 aaPredicted RBP2.11□□□□□ -2.07
CKS1YBR135W YKL023C-AQ2V2P3 75 aa2.11□□□□□ -2.07
CKS1YBR135W YDL022C-AP0C5L6 82 aa2.1□□□□□ -2.07
CKS1YBR135W DDR2P89113 61 aa2.1□□□□□ -2.07
CKS1YBR135W YOR072WQ08486 104 aa2.1□□□□□ -2.07
CKS1YBR135W YNL042W-BQ3E7Z2 85 aa2.1□□□□□ -2.07
CKS1YBR135W YNL190WP53872 204 aa2.09□□□□□ -2.07
CKS1YBR135W YAR064WP39563 99 aa2.08□□□□□ -2.08
CKS1YBR135W YBR230W-AQ3E762 66 aa2.07□□□□□ -2.08
CKS1YBR135W YJL127C-BQ3E828 52 aa2.07□□□□□ -2.08
CKS1YBR135W YBR201C-AQ2V2Q3 67 aa2.06□□□□□ -2.08
CKS1YBR135W YOL013W-AP0C272 63 aaPredicted RBP2.05□□□□□ -2.08
CKS1YBR135W YIL102CP40488 101 aa2.03□□□□□ -2.08
CKS1YBR135W YJR128WP47162 119 aa2.03□□□□□ -2.08
CKS1YBR135W ATP17Q06405 101 aa2.03□□□□□ -2.08
CKS1YBR135W YDR182W-AQ3E796 67 aa2.03□□□□□ -2.08
CKS1YBR135W ATP18P81450 59 aa2.01□□□□□ -2.09
CKS1YBR135W YOR034C-AQ3E735 80 aa2.01□□□□□ -2.09
CKS1YBR135W YOL097W-AQ3E7Y9 61 aa2□□□□□ -2.09
CKS1YBR135W YLR157W-DP0CE99 70 aa1.98□□□□□ -2.09
CKS1YBR135W RPS30AP0CX33 63 aaKnown RBP1.98□□□□□ -2.09
CKS1YBR135W RPS30BP0CX34 63 aaKnown RBP1.98□□□□□ -2.09
CKS1YBR135W RPL37AP49166 88 aaKnown RBP1.98□□□□□ -2.09
CKS1YBR135W COX7P10174 60 aa1.97□□□□□ -2.09
CKS1YBR135W SDH6Q3E785 79 aa1.97□□□□□ -2.09
CKS1YBR135W HUB1Q6Q546 73 aa1.97□□□□□ -2.09
CKS1YBR135W HHY1P39982 102 aa1.96□□□□□ -2.1
CKS1YBR135W EDC1P53080 175 aaPredicted RBP1.95□□□□□ -2.1
CKS1YBR135W YJR107C-AP0CT86 78 aa1.94□□□□□ -2.1
CKS1YBR135W YOL166W-AQ8TGJ1 51 aa1.94□□□□□ -2.1
CKS1YBR135W RPL37BP51402 88 aaKnown RBP1.92□□□□□ -2.1
CKS1YBR135W YHR213W-BQ8TGK1 99 aa1.92□□□□□ -2.1
CKS1YBR135W YJL133C-AQ3E7A3 74 aa1.91□□□□□ -2.1
CKS1YBR135W YFR009W-AP0C5M9 85 aa1.9□□□□□ -2.11
CKS1YBR135W RPL38P49167 78 aaKnown RBP1.9□□□□□ -2.11
CKS1YBR135W YBR072C-AQ3E794 53 aa1.9□□□□□ -2.11
CKS1YBR135W Q0017Q9ZZX8 53 aa1.85□□□□□ -2.11
CKS1YBR135W YHR073W-AP0C5N7 58 aa1.84□□□□□ -2.11
CKS1YBR135W YMR001C-AQ8TGS9 76 aa1.83□□□□□ -2.12
CKS1YBR135W YOR316C-AQ3E806 69 aa1.79□□□□□ -2.12
CKS1YBR135W YOR394C-AQ8TGJ0 55 aa1.77□□□□□ -2.13
CKS1YBR135W OLI1P61829 76 aa1.71□□□□□ -2.14
CKS1YBR135W YML054C-AQ3E809 52 aa1.69□□□□□ -2.14
CKS1YBR135W YLR157W-EP0CF00 54 aa1.68□□□□□ -2.14
CKS1YBR135W YOL164W-AQ3E7A5 60 aa1.68□□□□□ -2.14
CKS1YBR135W YGR146C-AQ8TGT9 53 aa1.68□□□□□ -2.14
CKS1YBR135W YBR016WP38216 128 aa1.67□□□□□ -2.14
CKS1YBR135W RPS29BP41058 56 aaKnown RBP1.65□□□□□ -2.15
CKS1YBR135W RPS29AP41057 56 aaKnown RBP1.63□□□□□ -2.15
CKS1YBR135W YBL044WP38194 122 aa1.61□□□□□ -2.15
CKS1YBR135W YCR108CQ3E819 63 aa1.53□□□□□ -2.16
CKS1YBR135W YOR072W-BQ3E832 53 aa1.39□□□□□ -2.19
CKS1YBR135W YHR050W-AQ05451 56 aa1.18□□□□□ -2.22
Retrieved 63 of 5,963 RNA–protein pairs in 11.5 ms