RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YMR230W-AQ3E7B5 62 aa1.2□□□□□ -2.22
NUP170YBL079W SEN15Q04675 128 aa1.19□□□□□ -2.22
NUP170YBL079W YBR201C-AQ2V2Q3 67 aa1.19□□□□□ -2.22
NUP170YBL079W SDH6Q3E785 79 aa1.19□□□□□ -2.22
NUP170YBL079W HUB1Q6Q546 73 aa1.19□□□□□ -2.22
NUP170YBL079W YIL102CP40488 101 aa1.19□□□□□ -2.22
NUP170YBL079W RPA12P32529 125 aaKnown RBP1.18□□□□□ -2.22
NUP170YBL079W YDR182W-AQ3E796 67 aa1.18□□□□□ -2.22
NUP170YBL079W YOR034C-AQ3E735 80 aa1.17□□□□□ -2.22
NUP170YBL079W YOR072W-BQ3E832 53 aa1.17□□□□□ -2.22
NUP170YBL079W YDR119W-AQ2V2P9 66 aa1.17□□□□□ -2.22
NUP170YBL079W YFR032C-BQ8TGU2 87 aa1.16□□□□□ -2.22
NUP170YBL079W YOL013W-AP0C272 63 aaPredicted RBP1.15□□□□□ -2.22
NUP170YBL079W ATP17Q06405 101 aa1.15□□□□□ -2.23
NUP170YBL079W YLR285C-AQ3E771 56 aa1.14□□□□□ -2.23
NUP170YBL079W RPL37AP49166 88 aaKnown RBP1.14□□□□□ -2.23
NUP170YBL079W YOR394C-AQ8TGJ0 55 aa1.14□□□□□ -2.23
NUP170YBL079W YHR125WP38831 101 aa1.12□□□□□ -2.23
NUP170YBL079W YER188C-AP0C0V2 99 aa1.11□□□□□ -2.23
NUP170YBL079W YPR170W-BP0C5R9 85 aa1.11□□□□□ -2.23
NUP170YBL079W RPS30AP0CX33 63 aaKnown RBP1.11□□□□□ -2.23
NUP170YBL079W RPS30BP0CX34 63 aaKnown RBP1.11□□□□□ -2.23
NUP170YBL079W YNL198CP40166 100 aa1.11□□□□□ -2.23
NUP170YBL079W YOL014WQ08110 124 aa1.11□□□□□ -2.23
NUP170YBL079W YBL044WP38194 122 aa1.09□□□□□ -2.23
NUP170YBL079W YMR122CQ03879 124 aa1.09□□□□□ -2.24
NUP170YBL079W YJL144WP47009 104 aa1.07□□□□□ -2.24
NUP170YBL079W YDR246W-AQ3E763 66 aa1.07□□□□□ -2.24
NUP170YBL079W SLO1Q3E784 85 aa1.07□□□□□ -2.24
NUP170YBL079W YMR001C-AQ8TGS9 76 aa1.06□□□□□ -2.24
NUP170YBL079W TOM6P33448 61 aa1.05□□□□□ -2.24
NUP170YBL079W YHR050W-AQ05451 56 aa1.05□□□□□ -2.24
NUP170YBL079W YPL038W-AQ3E7B4 63 aa1.05□□□□□ -2.24
NUP170YBL079W YFL065CP43539 102 aa1.03□□□□□ -2.24
NUP170YBL079W YPR203WQ08994 102 aa1.03□□□□□ -2.24
NUP170YBL079W YBR072C-AQ3E794 53 aa1.02□□□□□ -2.25
NUP170YBL079W NOP10Q6Q547 58 aaPredicted RBP1.01□□□□□ -2.25
NUP170YBL079W QCR10P37299 77 aa0.99□□□□□ -2.25
NUP170YBL079W YIL002W-AQ3E7Z5 69 aa0.99□□□□□ -2.25
NUP170YBL079W YOL166W-AQ8TGJ1 51 aa0.98□□□□□ -2.25
NUP170YBL079W YCR095W-AQ3E787 52 aa0.97□□□□□ -2.25
NUP170YBL079W YEL014CP39999 101 aa0.96□□□□□ -2.26
NUP170YBL079W YER078W-AQ3E7A2 54 aa0.94□□□□□ -2.26
NUP170YBL079W HHY1P39982 102 aa0.92□□□□□ -2.26
NUP170YBL079W YNL277W-AQ3E7Z0 62 aa0.9□□□□□ -2.27
NUP170YBL079W RPS28BP0C0X0 67 aaKnown RBP0.88□□□□□ -2.27
NUP170YBL079W YOR381W-AQ3E804 55 aa0.88□□□□□ -2.27
NUP170YBL079W RPS28AQ3E7X9 67 aaPredicted RBP0.88□□□□□ -2.27
NUP170YBL079W RUB1Q03919 77 aa0.87□□□□□ -2.27
NUP170YBL079W SBH1P52870 82 aa0.85□□□□□ -2.27
NUP170YBL079W YCR108CQ3E819 63 aa0.84□□□□□ -2.28
NUP170YBL079W SOM1Q05676 74 aa0.83□□□□□ -2.28
NUP170YBL079W YIR021W-AQ3E739 70 aa0.83□□□□□ -2.28
NUP170YBL079W YAL067W-AQ8TGK6 75 aa0.82□□□□□ -2.28
NUP170YBL079W YGL014C-AP0C5N1 53 aa0.8□□□□□ -2.28
NUP170YBL079W YLR412C-AQ3E742 68 aa0.79□□□□□ -2.28
NUP170YBL079W YLR157W-EP0CF00 54 aa0.76□□□□□ -2.29
NUP170YBL079W YBR121C-AP0C5L4 52 aa0.73□□□□□ -2.29
NUP170YBL079W YHR032W-AP0C5N6 59 aa0.69□□□□□ -2.3
NUP170YBL079W YHR086W-AQ3E746 53 aa0.63□□□□□ -2.31
NUP170YBL079W YML100W-AQ8TGT0 57 aa0.6□□□□□ -2.31
NUP170YBL079W YOL164W-AQ3E7A5 60 aa0.55□□□□□ -2.32
NUP170YBL079W YOR376W-AQ3E805 51 aa0.52□□□□□ -2.33
Retrieved 63 of 5,963 RNA–protein pairs in 55.4 ms