RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeastyeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP13YBL067C YPR010C-AA5Z2X5 72 aa3.35□□□□□ -1.87
UBP13YBL067C YDR034W-BQ6Q5X2 51 aa3.31□□□□□ -1.88
UBP13YBL067C CUP1-1P0CX80 61 aa3.26□□□□□ -1.89
UBP13YBL067C CUP1-2P0CX81 61 aa3.26□□□□□ -1.89
UBP13YBL067C YGR025WP53216 100 aa3.25□□□□□ -1.89
UBP13YBL067C SEN1Q00416 2231 aaKnown RBP3.25□□□□□ -1.89
UBP13YBL067C YOL164W-AQ3E7A5 60 aa3.24□□□□□ -1.89
UBP13YBL067C RPS27BP38711 82 aa3.22□□□□□ -1.89
UBP13YBL067C YDR524C-BQ3E6R4 66 aa3.21□□□□□ -1.89
UBP13YBL067C YLR157W-EP0CF00 54 aa3.19□□□□□ -1.9
UBP13YBL067C OLI1P61829 76 aa3.19□□□□□ -1.9
UBP13YBL067C TEL1P38110 2787 aa3.19□□□□□ -1.9
UBP13YBL067C YLR307C-AQ3E825 87 aa3.19□□□□□ -1.9
UBP13YBL067C YFR009W-AP0C5M9 85 aa3.17□□□□□ -1.9
UBP13YBL067C YCR108CQ3E819 63 aa3.16□□□□□ -1.9
UBP13YBL067C FMP27Q06179 2628 aa3.14□□□□□ -1.91
UBP13YBL067C IRA2P19158 3079 aa3.12□□□□□ -1.91
UBP13YBL067C TOS6P48560 102 aa3.11□□□□□ -1.91
UBP13YBL067C YBR016WP38216 128 aa3.1□□□□□ -1.91
UBP13YBL067C COA2Q3E823 68 aa3.09□□□□□ -1.91
UBP13YBL067C YBL044WP38194 122 aa3.08□□□□□ -1.92
UBP13YBL067C YBR230W-AQ3E762 66 aa3.08□□□□□ -1.92
UBP13YBL067C RPL37AP49166 88 aaKnown RBP3.08□□□□□ -1.92
UBP13YBL067C GCN1P33892 2672 aaKnown RBP3.06□□□□□ -1.92
UBP13YBL067C IRA1P18963 3092 aa3.01□□□□□ -1.93
UBP13YBL067C SIP18P50263 79 aa3.01□□□□□ -1.93
UBP13YBL067C PRP8P33334 2413 aaKnown RBP2.98□□□□□ -1.93
UBP13YBL067C UTP20P35194 2493 aaKnown RBP2.97□□□□□ -1.93
UBP13YBL067C YGR146C-AQ8TGT9 53 aa2.93□□□□□ -1.94
UBP13YBL067C YLR342W-AQ3E810 57 aa2.91□□□□□ -1.94
UBP13YBL067C RPL37BP51402 88 aaKnown RBP2.89□□□□□ -1.95
UBP13YBL067C CSF1Q12150 2958 aa2.89□□□□□ -1.95
UBP13YBL067C MEC1P38111 2368 aa2.85□□□□□ -1.95
UBP13YBL067C TOM7P53507 60 aa2.85□□□□□ -1.95
UBP13YBL067C TRA1P38811 3744 aa2.85□□□□□ -1.95
UBP13YBL067C YJL133C-AQ3E7A3 74 aa2.84□□□□□ -1.96
UBP13YBL067C YIL046W-AQ3E7Z4 54 aa2.78□□□□□ -1.96
UBP13YBL067C YOR008C-AQ3E7B9 74 aa2.77□□□□□ -1.97
UBP13YBL067C YBR056W-AI2HB52 66 aa2.74□□□□□ -1.97
UBP13YBL067C COX9P07255 59 aa2.66□□□□□ -1.98
UBP13YBL067C YLL006W-AQ3E814 58 aa2.66□□□□□ -1.98
UBP13YBL067C DDR2P89113 61 aa2.58□□□□□ -2
UBP13YBL067C DYN1P36022 4092 aa2.52□□□□□ -2.01
UBP13YBL067C MDN1Q12019 4910 aaKnown RBP2.49□□□□□ -2.01
UBP13YBL067C YOR316C-AQ3E806 69 aa2.46□□□□□ -2.02
UBP13YBL067C YJL127C-BQ3E828 52 aa2.44□□□□□ -2.02
UBP13YBL067C RPS29BP41058 56 aaKnown RBP2.42□□□□□ -2.02
UBP13YBL067C YGL258W-AQ3E740 77 aa2.41□□□□□ -2.02
UBP13YBL067C YOR072W-BQ3E832 53 aa2.41□□□□□ -2.02
UBP13YBL067C Q0297Q9ZZV8 51 aa2.4□□□□□ -2.03
UBP13YBL067C RPL29P05747 59 aaPredicted RBP2.37□□□□□ -2.03
UBP13YBL067C NCE101Q02820 53 aa2.23□□□□□ -2.05
UBP13YBL067C YDR034C-AP0C289 58 aa2.21□□□□□ -2.06
UBP13YBL067C RPL39P04650 51 aa2.13□□□□□ -2.07
UBP13YBL067C YHR073W-AP0C5N7 58 aa2.11□□□□□ -2.07
UBP13YBL067C YMR105W-AQ8TGS8 64 aa2.03□□□□□ -2.08
UBP13YBL067C HOR7Q05827 59 aa2.02□□□□□ -2.09
UBP13YBL067C PMP3P87284 55 aa1.98□□□□□ -2.09
UBP13YBL067C RPS29AP41057 56 aaKnown RBP1.95□□□□□ -2.1
UBP13YBL067C YLL066W-BQ8TGJ7 56 aa1.67□□□□□ -2.14
UBP13YBL067C YHR050W-AQ05451 56 aa1.66□□□□□ -2.14
UBP13YBL067C Q0017Q9ZZX8 53 aa1.53□□□□□ -2.16
UBP13YBL067C YML054C-AQ3E809 52 aa1.51□□□□□ -2.17
Retrieved 63 of 5,963 RNA–protein pairs in 5.4 ms