RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W YDR010CQ12426 110 aa2.04□□□□□ -2.08
NUP60YAR002W MDN1Q12019 4910 aaKnown RBP2.03□□□□□ -2.08
NUP60YAR002W YJR128WP47162 119 aa2.03□□□□□ -2.08
NUP60YAR002W SDH6Q3E785 79 aa2.02□□□□□ -2.09
NUP60YAR002W YOR316C-AQ3E806 69 aa2.02□□□□□ -2.09
NUP60YAR002W COX7P10174 60 aa2.02□□□□□ -2.09
NUP60YAR002W SBH1P52870 82 aa2.01□□□□□ -2.09
NUP60YAR002W YLR255CO13574 117 aa2□□□□□ -2.09
NUP60YAR002W YGR164WP53291 111 aa2□□□□□ -2.09
NUP60YAR002W YGR146C-AQ8TGT9 53 aa2□□□□□ -2.09
NUP60YAR002W YMR001C-AQ8TGS9 76 aa1.99□□□□□ -2.09
NUP60YAR002W YFR032C-BQ8TGU2 87 aa1.99□□□□□ -2.09
NUP60YAR002W COX8P04039 78 aa1.99□□□□□ -2.09
NUP60YAR002W YKL065W-AQ2V2P2 73 aa1.99□□□□□ -2.09
NUP60YAR002W YOR381W-AQ3E804 55 aa1.99□□□□□ -2.09
NUP60YAR002W HUB1Q6Q546 73 aa1.99□□□□□ -2.09
NUP60YAR002W YNL122CP53921 115 aaPredicted RBP1.98□□□□□ -2.09
NUP60YAR002W YMR122CQ03879 124 aa1.98□□□□□ -2.09
NUP60YAR002W OST5Q92316 86 aa1.97□□□□□ -2.09
NUP60YAR002W YJL144WP47009 104 aa1.95□□□□□ -2.1
NUP60YAR002W YBR201C-AQ2V2Q3 67 aa1.95□□□□□ -2.1
NUP60YAR002W YBR016WP38216 128 aa1.95□□□□□ -2.1
NUP60YAR002W OLI1P61829 76 aa1.95□□□□□ -2.1
NUP60YAR002W YBL008W-AQ3E821 79 aa1.95□□□□□ -2.1
NUP60YAR002W YER188C-AP0C0V2 99 aa1.94□□□□□ -2.1
NUP60YAR002W YLR412C-AQ3E742 68 aa1.93□□□□□ -2.1
NUP60YAR002W YAL067W-AQ8TGK6 75 aa1.93□□□□□ -2.1
NUP60YAR002W YBR121C-AP0C5L4 52 aa1.92□□□□□ -2.1
NUP60YAR002W YIL156W-BQ2V2P4 73 aa1.92□□□□□ -2.1
NUP60YAR002W CMC4Q3E7A9 73 aa1.92□□□□□ -2.1
NUP60YAR002W MRX7P53869 86 aa1.91□□□□□ -2.1
NUP60YAR002W YCR095W-AQ3E787 52 aa1.91□□□□□ -2.1
NUP60YAR002W RPL37BP51402 88 aaKnown RBP1.9□□□□□ -2.11
NUP60YAR002W FYV12Q08559 129 aa1.88□□□□□ -2.11
NUP60YAR002W YGL034CP53186 121 aa1.88□□□□□ -2.11
NUP60YAR002W ATP17Q06405 101 aa1.87□□□□□ -2.11
NUP60YAR002W RPS28BP0C0X0 67 aaKnown RBP1.85□□□□□ -2.11
NUP60YAR002W RPS28AQ3E7X9 67 aaPredicted RBP1.85□□□□□ -2.11
NUP60YAR002W Q0017Q9ZZX8 53 aa1.84□□□□□ -2.12
NUP60YAR002W YNL277W-AQ3E7Z0 62 aa1.82□□□□□ -2.12
NUP60YAR002W YJL009WP47078 108 aa1.8□□□□□ -2.12
NUP60YAR002W YBL044WP38194 122 aa1.8□□□□□ -2.12
NUP60YAR002W YOR394C-AQ8TGJ0 55 aa1.8□□□□□ -2.12
NUP60YAR002W YEL014CP39999 101 aa1.77□□□□□ -2.13
NUP60YAR002W YML054C-AQ3E809 52 aa1.77□□□□□ -2.13
NUP60YAR002W YCR108CQ3E819 63 aa1.77□□□□□ -2.13
NUP60YAR002W QCR10P37299 77 aa1.74□□□□□ -2.13
NUP60YAR002W YDR210WQ03482 75 aa1.73□□□□□ -2.13
NUP60YAR002W YGL014C-AP0C5N1 53 aa1.73□□□□□ -2.13
NUP60YAR002W YML100W-AQ8TGT0 57 aa1.73□□□□□ -2.13
NUP60YAR002W RPL37AP49166 88 aaKnown RBP1.72□□□□□ -2.13
NUP60YAR002W YOR376W-AQ3E805 51 aa1.72□□□□□ -2.13
NUP60YAR002W YHR032W-AP0C5N6 59 aa1.69□□□□□ -2.14
NUP60YAR002W YOR072W-BQ3E832 53 aa1.66□□□□□ -2.14
NUP60YAR002W SOM1Q05676 74 aa1.65□□□□□ -2.15
NUP60YAR002W HHY1P39982 102 aa1.6□□□□□ -2.15
NUP60YAR002W YBR072C-AQ3E794 53 aa1.58□□□□□ -2.16
NUP60YAR002W YHR086W-AQ3E746 53 aa1.46□□□□□ -2.18
NUP60YAR002W RPS29BP41058 56 aaKnown RBP1.45□□□□□ -2.18
NUP60YAR002W RPS29AP41057 56 aaKnown RBP1.38□□□□□ -2.19
NUP60YAR002W YHR050W-AQ05451 56 aa1.34□□□□□ -2.19
NUP60YAR002W YOL164W-AQ3E7A5 60 aa1.22□□□□□ -2.21
NUP60YAR002W YLR157W-EP0CF00 54 aa1.11□□□□□ -2.23
Retrieved 63 of 5,963 RNA–protein pairs in 6.4 ms