RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 REXO2Q9Y3B8 237 aaKnown RBP12.93□□□□□ -0.34
LINC00339-213ENST00000642137 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-213ENST00000642137 FAM170AA1A519 330 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 YJEFN3A6XGL0 299 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 E7ENQ6 273 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 PJA2O43164 708 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 LTFP02788 710 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 KRT3P12035 628 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 FOSL2P15408 326 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 ABCB4P21439 1286 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 LTBRP36941 435 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 VAV2P52735 878 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 YWHAZP63104 245 aaKnown RBP12.92□□□□□ -0.34
LINC00339-213ENST00000642137 MAMLD1Q13495 774 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 TCEAL1Q15170 157 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 RARS2Q5T160 578 aaKnown RBP12.92□□□□□ -0.34
LINC00339-213ENST00000642137 TMC5Q6UXY8 1006 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 SLC26A9Q7LBE3 791 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 BHLHA9Q7RTU4 235 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 SCD5Q86SK9 330 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 TMC8Q8IU68 726 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 HS6ST3Q8IZP7 471 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 SMG7Q92540 1137 aaKnown RBP12.92□□□□□ -0.34
LINC00339-213ENST00000642137 NDRG1Q92597 394 aaKnown RBP12.92□□□□□ -0.34
LINC00339-213ENST00000642137 GOLGA1Q92805 767 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 CORO1BQ9BR76 489 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 TRIM62Q9BVG3 475 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 SELENOOQ9BVL4 669 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 ADAM7Q9H2U9 754 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 IL21Q9HBE4 155 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 ZNF334Q9HCZ1 680 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-213ENST00000642137 ASAH2Q9NR71 780 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 ABCC13Q9NSE7 274 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 CLIC5Q9NZA1 410 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 MYO1AQ9UBC5 1043 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 TMEM59LQ9UK28 342 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 SCINQ9Y6U3 715 aa12.92□□□□□ -0.34
LINC00339-213ENST00000642137 SOBPA7XYQ1 873 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 BTNL10A8MVZ5 291 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 GOLGA8SH3BPF8 625 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 ZNF197O14709 1029 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 HSF2BPO75031 334 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 RHOP08100 348 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 CCDC175P0C221 793 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 RALAP11233 206 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 GABRR2P28476 465 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 CDC25CP30307 473 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 YWHAGP61981 247 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC00339-213ENST00000642137 DLX2Q07687 328 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-213ENST00000642137 ATAT1Q5SQI0 421 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 PPP1R15BQ5SWA1 713 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 FAM102AQ5T9C2 384 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-213ENST00000642137 BSPRYQ5W0U4 402 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 BTBD8Q5XKL5 378 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 DNAJC24Q6P3W2 148 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 ZNF662Q6ZS27 426 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 GRASPQ7Z6J2 395 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-213ENST00000642137 PHLDB2Q86SQ0 1253 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 KIAA1328Q86T90 577 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 TMEM150AQ86TG1 271 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 RHOT2Q8IXI1 618 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 FEZF2Q8TBJ5 459 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 ARHGEF26Q96DR7 871 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 MSLNLQ96KJ4 702 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 DESI2Q9BSY9 194 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 POPDC2Q9HBU9 364 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 HCFC1R1Q9NWW0 138 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 GMIPQ9P107 970 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 UVRAGQ9P2Y5 699 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC00339-213ENST00000642137 DENND4CQ5VZ89 1909 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 DOCK6Q96HP0 2047 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 NOTCH4Q99466 2003 aa12.91□□□□□ -0.34
LINC00339-213ENST00000642137 LAMA2P24043 3122 aaKnown RBP12.91□□□□□ -0.34
LINC00339-213ENST00000642137 CHD7Q9P2D1 2997 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 A0A0A6YYK5 440 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-213ENST00000642137 A0A1W2PQH9 124 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 ZNF840PA6NDX5 716 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 TBX10O75333 385 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 FYNP06241 537 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 MYL4P12829 197 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 PFKLP17858 780 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 NOS2P35228 1153 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 KIF5AQ12840 1032 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 TAF5Q15542 800 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 CCDC85BQ15834 202 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-213ENST00000642137 PRSS36Q5K4E3 855 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 CES5AQ6NT32 575 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 EP400NLQ6ZTU2 488 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 HFE2Q6ZVN8 426 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 GAREM2Q75VX8 874 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 PDZD4Q76G19 769 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-213ENST00000642137 SLC35G2Q8TBE7 412 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 FAM149B1Q96BN6 582 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 TRIM44Q96DX7 344 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-213ENST00000642137 PIWIL1Q96J94 861 aaKnown RBP12.9□□□□□ -0.34
LINC00339-213ENST00000642137 CALR3Q96L12 384 aaKnown RBP12.9□□□□□ -0.34
LINC00339-213ENST00000642137 SLC2A13Q96QE2 648 aa12.9□□□□□ -0.34
LINC00339-213ENST00000642137 GCNAQ96QF7 691 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms