RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CALUO43852 315 aaPredicted RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 GDF9O60383 454 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 AP1G2O75843 785 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 PFKLP17858 780 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 YWHAQP27348 245 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 RAD23BP54727 409 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 MAP3K7CLP57077 242 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 ADAM9Q13443 819 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 LRRC32Q14392 662 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 DHCR24Q15392 516 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 EDRF1Q3B7T1 1238 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 COBLL1Q53SF7 1204 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 PPP1R26Q5T8A7 1209 aaPredicted RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 C1orf228Q6PIY5 440 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 SARM1Q6SZW1 724 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 TMEM92Q6UXU6 159 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 C11orf57Q6ZUT1 292 aaPredicted RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 LONP2Q86WA8 852 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 UNC93AQ86WB7 457 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 MIB1Q86YT6 1006 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 ETFBKMTQ8IXQ9 262 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 FAM186BQ8IYM0 893 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 TRIML1Q8N9V2 468 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 SLC4A11Q8NBS3 891 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 TTC16Q8NEE8 873 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 RPLP0P6Q8NHW5 317 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 USP33Q8TEY7 942 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 CD101Q93033 1021 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 FBXO32Q969P5 355 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 HHIPQ96QV1 700 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 MED15Q96RN5 788 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 HNRNPABQ99729 332 aaKnown RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 DUSP9Q99956 384 aaKnown RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 ZSWIM1Q9BR11 485 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 KLF16Q9BXK1 252 aaPredicted RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 CD248Q9HCU0 757 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 DMAP1Q9NPF5 467 aaPredicted RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 ZDHHC4Q9NPG8 344 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 THG1LQ9NWX6 298 aaKnown RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 CFAP97Q9P2B7 532 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 DACH1Q9UI36 760 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 NUDT5Q9UKK9 219 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.3□□□□□ -1.08
PNKP-229ENST00000637897 CACNA1GO43497 2377 aa8.3□□□□□ -1.08
PNKP-229ENST00000637897 PPP1R3GB7ZBB8 358 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 CYP26A1O43174 497 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 ADAM23O75077 832 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 SMC2O95347 1197 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 CALCAP01258 141 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 KLKB1P03952 638 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 MSNP26038 577 aaKnown RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 ANXA13P27216 316 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 ADORA2BP29275 332 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 CDC25BP30305 580 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 PSMC2P35998 433 aaKnown RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 PIK3CAP42336 1068 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 KIR2DL1P43626 348 aaPredicted RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 KIF11P52732 1056 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 ATXN1P54253 815 aaKnown RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 ENPEPQ07075 957 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 SPEM2Q0P670 501 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 GRSF1Q12849 480 aaKnown RBP eCLIP8.29□□□□□ -1.08
PNKP-229ENST00000637897 RSPO4Q2I0M5 234 aaPredicted RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 CT47A1Q5JQC4 288 aaPredicted RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 LY6G5CQ5SRR4 150 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 ISM2Q6H9L7 571 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 INTS8Q75QN2 995 aaKnown RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 KBTBD6Q86V97 674 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 TMEM25Q86YD3 366 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 BBS7Q8IWZ6 715 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 FAM160A2Q8N612 972 aaPredicted RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 FRMD1Q8N878 549 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 LMO3Q8TAP4 145 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 NDRG1Q92597 394 aaKnown RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 TAF4BQ92750 862 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 KAT5Q92993 513 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 ATP2A3Q93084 1043 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 SMARCE1Q969G3 411 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 SMARCD1Q96GM5 515 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 TRIM5Q9C035 493 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 MMRN2Q9H8L6 949 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 TMEM8AQ9HCN3 771 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 MAN1B1Q9UKM7 699 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 COQ4Q9Y3A0 265 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 USP3Q9Y6I4 520 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 TPRP12270 2363 aaKnown RBP8.29□□□□□ -1.08
PNKP-229ENST00000637897 LAMA1P25391 3075 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 RALGAPA1Q6GYQ0 2036 aa8.29□□□□□ -1.08
PNKP-229ENST00000637897 A0A1W2PQH9 124 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 RNF225M0QZC1 329 aaPredicted RBP8.28□□□□□ -1.08
PNKP-229ENST00000637897 SGK1O00141 431 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 BIN1O00499 593 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 KRT37O76014 449 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 RTN3O95197 1032 aaPredicted RBP8.28□□□□□ -1.08
PNKP-229ENST00000637897 ABL1P00519 1130 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 MBL2P11226 248 aaPredicted RBP8.28□□□□□ -1.08
PNKP-229ENST00000637897 CD58P19256 250 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 DRD1P21728 446 aa8.28□□□□□ -1.08
PNKP-229ENST00000637897 PPP3CCP48454 512 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms