RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, human

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCA-215	ENST00000637657	FAAP100	Q0VG06	881 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	COG2	Q14746	738 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.55	□□□□□ -0.24	3e-6	■■■■■ 41.9
PCCA-215	ENST00000637657	LLGL1	Q15334	1064 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	AOC3	Q16853	763 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	TFDP3	Q5H9I0	405 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	METTL21C	Q5VZV1	264 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	PLA2G4F	Q68DD2	849 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	IYD	Q6PHW0	289 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	MIER3	Q7Z3K6	550 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	GPR141	Q7Z602	305 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	SETD3	Q86TU7	594 aa	Predicted RBP	13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	MINDY2	Q8NBR6	621 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	ACCS	Q96QU6	501 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	NACC1	Q96RE7	527 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	TRIM56	Q9BRZ2	755 aa	Known RBP	13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	NYX	Q9GZU5	481 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	RIMS3	Q9UJD0	308 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	VAV3	Q9UKW4	847 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	PCDHB2	Q9Y5E7	798 aa		13.55	□□□□□ -0.24
PCCA-215	ENST00000637657	SLC22A2	O15244	555 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	SIN3B	O75182	1162 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	FBXO21	O94952	628 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	BPGM	P07738	259 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	EEF2	P13639	858 aa	Known RBP	13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	ITGAX	P20702	1163 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	CNTF	P26441	200 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	CRHR1	P34998	444 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	SREBF1	P36956	1147 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	GCLM	P48507	274 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	NLRP11	P59045	1033 aa	Known RBP	13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	ITGA7	Q13683	1181 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	UBAP2L	Q14157	1087 aa	Known RBP	13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	ZBED5	Q49AG3	693 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	KCTD21	Q4G0X4	260 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	PRR16	Q569H4	304 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	CHERP	Q8IWX8	916 aa	Known RBP	13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	SLC35B2	Q8TB61	432 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	ADAMTS16	Q8TE57	1224 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	PPP4R1	Q8TF05	950 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	CCDC124	Q96CT7	223 aa	Known RBP	13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	RANBP9	Q96S59	729 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	KLF6	Q99612	283 aa	Predicted RBP	13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	SENP7	Q9BQF6	1050 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	GPATCH1	Q9BRR8	931 aa	Known RBP	13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	GINM1	Q9NU53	330 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	GIT1	Q9Y2X7	761 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657		A0A087WXM4	84 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657		A0A0B4J269	797 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	TRIM64C	A6NLI5	447 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	MEI4	A8MW99	385 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	SERPINB2	P05120	415 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	GSTT2	P0CG29	244 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	GSTT2B	P0CG30	244 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	FUT4	P22083	530 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	GRK2	P25098	689 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	SERPINB9	P50453	376 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	DLG4	P78352	724 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	TUBB3	Q13509	450 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	MON1B	Q7L1V2	547 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	GPR180	Q86V85	440 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	ZNF354C	Q86Y25	554 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	THAP11	Q96EK4	314 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	PLEKHA8	Q96JA3	519 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	HSD17B14	Q9BPX1	270 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	TDRD1	Q9BXT4	1180 aa	Known RBP	13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	TMEM8A	Q9HCN3	771 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	MRPL40	Q9NQ50	206 aa	Known RBP	13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	TMEM9	Q9P0T7	183 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	SEPT3	Q9UH03	358 aa		13.54	□□□□□ -0.24
PCCA-215	ENST00000637657	FOCAD	Q5VW36	1801 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657		H3BNH8	94 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	MCF2L	O15068	1137 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	PPP1R11	O60927	126 aa	Predicted RBP	13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	PDGFRB	P09619	1106 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	PTPN2	P17706	415 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	RPS3A	P61247	264 aa	Known RBP	13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	MOG	Q16653	247 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	RALGPS1	Q5JS13	557 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	PLEKHA7	Q6IQ23	1121 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	ELMSAN1	Q6PJG2	1045 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	NANOGNB	Q7Z5D8	188 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	AMIGO2	Q86SJ2	522 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	POU5F2	Q8N7G0	328 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	TNIP2	Q8NFZ5	429 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	HELQ	Q8TDG4	1101 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	CPT1B	Q92523	772 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	RMND5B	Q96G75	393 aa	Predicted RBP	13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	CCDC138	Q96M89	665 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	PPP1R10	Q96QC0	940 aa	Known RBP	13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	NEURL2	Q9BR09	285 aa		13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	CLK4	Q9HAZ1	481 aa	Known RBP	13.53	□□□□□ -0.24
PCCA-215	ENST00000637657	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.52	□□□□□ -0.24
PCCA-215	ENST00000637657	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.52	□□□□□ -0.24
PCCA-215	ENST00000637657	TCRBV9S1A1T	A0A576	114 aa		13.52	□□□□□ -0.24
PCCA-215	ENST00000637657	DYTN	A2CJ06	578 aa		13.52	□□□□□ -0.24
PCCA-215	ENST00000637657	KRT1	P04264	644 aa		13.52	□□□□□ -0.24
PCCA-215	ENST00000637657	CYP3A4	P08684	503 aa		13.52	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms