RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 IL17RCQ8NAC3 791 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 SPATA32Q96LK8 384 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 ARHGEF4Q9NR80 690 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 HMGXB4Q9UGU5 601 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 ZDHHC9Q9Y397 364 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 SH3BP1Q9Y3L3 701 aa19.55■□□□□ 0.72
CLN6-220ENST00000637450 FAM237AA0A1B0GTK4 181 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.54■□□□□ 0.72
CLN6-220ENST00000637450 KIF20AO95235 890 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 CAVIN2O95810 425 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 HLA-DRAP01903 254 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 HNRNPLP14866 589 aaKnown RBP eCLIP19.54■□□□□ 0.72
CLN6-220ENST00000637450 GBP1P32455 592 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 TIE1P35590 1138 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 KIR2DL1P43626 348 aaPredicted RBP19.54■□□□□ 0.72
CLN6-220ENST00000637450 PGFP49763 221 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 VAMP7P51809 220 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 MAP3K7CLP57077 242 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 CREB5Q02930 508 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 EMC10Q5UCC4 262 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 PMS2CLQ68D20 193 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 PHTF2Q8N3S3 785 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 ALLCQ8N6M5 410 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 C12orf29Q8N999 325 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 TXNDC5Q8NBS9 432 aaKnown RBP19.54■□□□□ 0.72
CLN6-220ENST00000637450 MDGA1Q8NFP4 955 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 CHAMP1Q96JM3 812 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 FBXO44Q9H4M3 255 aa19.54■□□□□ 0.72
CLN6-220ENST00000637450 HELZP42694 1942 aaKnown RBP19.54■□□□□ 0.72
CLN6-220ENST00000637450 SGK1O00141 431 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 RHOBTB3O94955 611 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 KLF8O95600 359 aaPredicted RBP19.53■□□□□ 0.72
CLN6-220ENST00000637450 SYKP43405 635 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 NDUFA8P51970 172 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 NFIL3Q16649 462 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 TCEAL6Q6IPX3 200 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 BBS7Q8IWZ6 715 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 ETFBKMTQ8IXQ9 262 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 OLIG1Q8TAK6 271 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 TCEAL3Q969E4 200 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 WBP2Q969T9 261 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 FAM49BQ9NUQ9 324 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 EML5Q05BV3 1969 aa19.53■□□□□ 0.72
CLN6-220ENST00000637450 HOXC11O43248 304 aaPredicted RBP19.52■□□□□ 0.72
CLN6-220ENST00000637450 TLR5O60602 858 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 ALDH1A2O94788 518 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 PRR29P0C7W0 189 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 PIK3CAP42336 1068 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 KRT85P78386 507 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 KDSRQ06136 332 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 INCA1Q0VD86 236 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 DPYDQ12882 1025 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 HTR3DQ70Z44 454 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 TMEM25Q86YD3 366 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 NAT16Q8N8M0 369 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 TWNKQ96RR1 684 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 HNRNPABQ99729 332 aaKnown RBP19.52■□□□□ 0.72
CLN6-220ENST00000637450 NACA2Q9H009 215 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 APOBEC3GQ9HC16 384 aaKnown RBP19.52■□□□□ 0.72
CLN6-220ENST00000637450 TLR8Q9NR97 1041 aaKnown RBP19.52■□□□□ 0.72
CLN6-220ENST00000637450 SPHK2Q9NRA0 654 aa19.52■□□□□ 0.72
CLN6-220ENST00000637450 TBC1D3BA6NDS4 549 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 HHLA1C9JL84 531 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 GREM1O60565 184 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 ADAM23O75077 832 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 TBX18O95935 607 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 FAM200BP0CF97 657 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 BCKDHBP21953 392 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 NR2F2P24468 414 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 ADORA2BP29275 332 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 GCLMP48507 274 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 ENPEPQ07075 957 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 EOGTQ5NDL2 527 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 BTBD8Q5XKL5 378 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 RNF43Q68DV7 783 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 CLEC20AQ6ZU45 233 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 INTS8Q75QN2 995 aaKnown RBP19.51■□□□□ 0.71
CLN6-220ENST00000637450 TTC30AQ86WT1 665 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 KCNV2Q8TDN2 545 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 CCDC47Q96A33 483 aaKnown RBP19.51■□□□□ 0.71
CLN6-220ENST00000637450 LSM14BQ9BX40 385 aaKnown RBP19.51■□□□□ 0.71
CLN6-220ENST00000637450 KLF16Q9BXK1 252 aaPredicted RBP19.51■□□□□ 0.71
CLN6-220ENST00000637450 CYP3A43Q9HB55 503 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 POLMQ9NP87 494 aaPredicted RBP19.51■□□□□ 0.71
CLN6-220ENST00000637450 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.51■□□□□ 0.715e-7■■■■■ 90.8
CLN6-220ENST00000637450 SCML2Q9UQR0 700 aa19.51■□□□□ 0.71
CLN6-220ENST00000637450 TULP3O75386 442 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 TRIM49P0CI25 452 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 TRIM49CP0CI26 452 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 IRF1P10914 325 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 TRIM21P19474 475 aaKnown RBP19.5■□□□□ 0.71
CLN6-220ENST00000637450 MCCD1P59942 119 aaPredicted RBP19.5■□□□□ 0.71
CLN6-220ENST00000637450 PPP3CAQ08209 521 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 ANO4Q32M45 955 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 PREPLQ4J6C6 727 aaPredicted RBP19.5■□□□□ 0.71
CLN6-220ENST00000637450 N4BP2L1Q5TBK1 243 aaPredicted RBP19.5■□□□□ 0.71
CLN6-220ENST00000637450 GPRIN1Q7Z2K8 1008 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 ABCA7Q8IZY2 2146 aa19.5■□□□□ 0.71
CLN6-220ENST00000637450 GUF1Q8N442 669 aaKnown RBP19.5■□□□□ 0.71
CLN6-220ENST00000637450 TAS1R2Q8TE23 839 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms