RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 CAPS2Q9BXY5 557 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 STMN4Q9H169 189 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 NXF3Q9H4D5 531 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 NPDC1Q9NQX5 325 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 METTL5Q9NRN9 209 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 SLC38A7Q9NVC3 462 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 GEMIN8Q9NWZ8 242 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 CWC15Q9P013 229 aaKnown RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 ANAPC5Q9UJX4 755 aa7.49□□□□□ -1.21
BRCA1-230ENST00000634433 MAGED1Q9Y5V3 778 aaPredicted RBP7.49□□□□□ -1.21
BRCA1-230ENST00000634433 hCG_1818297A0A087WSY0 165 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 LRRD1A4D1F6 860 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 A8MXQ7 604 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 KPNA7A9QM74 516 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 HUS1O60921 280 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 RPS6KA5O75582 802 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 IVLP07476 585 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 AKAP5P24588 427 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 GNL1P36915 607 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 PSMC4P43686 418 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ACADSBP45954 432 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ZNF200P98182 395 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 BYSLQ13895 437 aaKnown RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 TAF11Q15544 211 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 UBXN11Q5T124 520 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 C6orf118Q5T5N4 469 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 KAZNQ674X7 775 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ZNF449Q6P9G9 518 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 KDM7AQ6ZMT4 941 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 MAP7D3Q8IWC1 876 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 CRYBG2Q8N1P7 616 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 APPL2Q8NEU8 664 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 JOSD2Q8TAC2 188 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 C18orf25Q96B23 403 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ZBTB9Q96C00 473 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 TNIP3Q96KP6 325 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 SERINC2Q96SA4 455 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ZIC5Q96T25 663 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 MRPL45Q9BRJ2 306 aaKnown RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 SRA1Q9HD15 236 aaKnown RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 TUBGCP4Q9UGJ1 667 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 GTF2IRD1Q9UHL9 959 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 RALGAPA2Q2PPJ7 1873 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 PI4K2BG5E9Z4 385 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 SEPT4O43236 478 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 LIASO43766 372 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 LRCH4O75427 683 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 CYBAP13498 195 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 PDGFRAP16234 1089 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 NR1D1P20393 614 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 KDELR1P24390 212 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 LRPAP1P30533 357 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 CDKN2BP42772 138 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ST13P50502 369 aaKnown RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 SLC8A3P57103 927 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 SLC25A11Q02978 314 aaKnown RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ZNF844Q08AG5 666 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 LLGL1Q15334 1064 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 KRT71Q3SY84 523 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ATP13A4Q4VNC1 1196 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 DAB2IPQ5VWQ8 1189 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 TMEM110Q86TL2 294 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ACOT1Q86TX2 421 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 TOP6BLQ8N6T0 577 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 KCTD6Q8NC69 237 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ATG4AQ8WYN0 398 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 SKA1Q96BD8 255 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 TMEM109Q9BVC6 243 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 MAK16Q9BXY0 300 aaKnown RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 SLC4A5Q9BY07 1137 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ROPN1BQ9BZX4 212 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ROPN1Q9HAT0 212 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 ZNF148Q9UQR1 794 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 R3HDM2Q9Y2K5 976 aaKnown RBP7.48□□□□□ -1.21
BRCA1-230ENST00000634433 HES2Q9Y543 173 aa7.48□□□□□ -1.21
BRCA1-230ENST00000634433 BOLA2-SMG1P6H3BVE0 249 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 GPR182O15218 404 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 SHOX2O60902 331 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 TRUB2O95900 331 aaKnown RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 ITGAVP06756 1048 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 BCAT1P54687 386 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 VCPP55072 806 aaKnown RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 SLC6A3Q01959 620 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 ADCY2Q08462 1091 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 BST2Q10589 180 aaKnown RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 IFT88Q13099 833 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 TFDP2Q14188 446 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 TAZQ16635 292 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 SOWAHAQ2M3V2 549 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 PKDCCQ504Y2 493 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 BOLA3Q53S33 107 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 PPP1R26Q5T8A7 1209 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 KIAA0907Q7Z7F0 614 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 FAM228AQ86W67 206 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 ANKRD52Q8NB46 1076 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 CMASQ8NFW8 434 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 ZNF296Q8WUU4 475 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-230ENST00000634433 TMEM40Q8WWA1 233 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 RAPGEF5Q92565 580 aa7.47□□□□□ -1.21
BRCA1-230ENST00000634433 NKD2Q969F2 451 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms