RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 CHORDC1Q9UHD1 332 aaPredicted RBP12.15□□□□□ -0.46
CPNE3-210ENST00000621245 MAPK8IP1Q9UQF2 711 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 GON4LQ3T8J9 2241 aa12.15□□□□□ -0.46
CPNE3-210ENST00000621245 LRP3O75074 770 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 CLSTN1O94985 981 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 NFATC1O95644 943 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 TRIM49P0CI25 452 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 TRIM49CP0CI26 452 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 CCDC192P0DO97 292 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 IRF1P10914 325 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 MBL2P11226 248 aaPredicted RBP12.14□□□□□ -0.47
CPNE3-210ENST00000621245 BCKDHBP21953 392 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 ATICP31939 592 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 DHCR24Q15392 516 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 ZACNQ401N2 412 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 PLK5Q496M5 336 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 ZNF667Q5HYK9 610 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 EMC10Q5UCC4 262 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 RHBDF2Q6PJF5 856 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 SYT13Q7L8C5 426 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 CACNA2D4Q7Z3S7 1137 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 NUP93Q8N1F7 819 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 PHTF2Q8N3S3 785 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 SLC2A14Q8TDB8 520 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 NETO1Q8TDF5 533 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 FBXO32Q969P5 355 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 JAKMIP2Q96AA8 810 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 P2RY11Q96G91 374 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 CNTNAP3BQ96NU0 1288 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 RTKNQ9BST9 563 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 MED10Q9BTT4 135 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 APOBEC3GQ9HC16 384 aaKnown RBP12.14□□□□□ -0.47
CPNE3-210ENST00000621245 FAM49BQ9NUQ9 324 aa12.14□□□□□ -0.47
CPNE3-210ENST00000621245 CGNQ9P2M7 1197 aaKnown RBP12.14□□□□□ -0.47
CPNE3-210ENST00000621245 TRIM24O15164 1050 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 ATG13O75143 517 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 AP1G2O75843 785 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 APBB3O95704 486 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 TBX18O95935 607 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 HLA-DRAP01903 254 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 RPN1P04843 607 aaKnown RBP12.13□□□□□ -0.47
CPNE3-210ENST00000621245 YWHAQP27348 245 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 NDST1P52848 882 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 PPP3CAQ08209 521 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 PPM1JQ5JR12 505 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 PLA2G2CQ5R387 149 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 CEP135Q66GS9 1140 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 NUDT18Q6ZVK8 323 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 SV2AQ7L0J3 742 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 SLC9A9Q8IVB4 645 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 BBS7Q8IWZ6 715 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 SMYD4Q8IYR2 804 aaPredicted RBP12.13□□□□□ -0.47
CPNE3-210ENST00000621245 ADGRG2Q8IZP9 1017 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 ALLCQ8N6M5 410 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 FRMD1Q8N878 549 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 CEP295NLQ96MC4 621 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 GDPD2Q9HCC8 539 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 OSER1Q9NX31 292 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 IL37Q9NZH6 218 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 HCN2Q9UL51 889 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 FREM2Q5SZK8 3169 aa12.13□□□□□ -0.47
CPNE3-210ENST00000621245 ASCC3Q8N3C0 2202 aaKnown RBP12.13□□□□□ -0.47
CPNE3-210ENST00000621245 CCDC163A0A0D9SF12 145 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 FAM237AA0A1B0GTK4 181 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 FAM92AA1XBS5 289 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 PPP1R3GB7ZBB8 358 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 HHLA1C9JL84 531 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 SGK1O00141 431 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 MDM4O15151 490 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 ADAM23O75077 832 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 AKAP3O75969 853 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 ASS1P00966 412 aaKnown RBP12.12□□□□□ -0.47
CPNE3-210ENST00000621245 FAM163BP0C2L3 166 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 ZDHHC11BP0C7U3 371 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 CMA1P23946 247 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 ADORA2BP29275 332 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 MPLP40238 635 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 PIK3CAP42336 1068 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 GCLMP48507 274 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 DGKEP52429 567 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 MAP3K7CLP57077 242 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 AMPD2Q01433 879 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 DPYDQ12882 1025 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 FBXO43Q4G163 708 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 AASDHQ4L235 1098 aaPredicted RBP12.12□□□□□ -0.47
CPNE3-210ENST00000621245 LY6G5CQ5SRR4 150 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 ATL3Q6DD88 541 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 ANO7Q6IWH7 933 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 CAMKK1Q8N5S9 505 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 NAT16Q8N8M0 369 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 MDGA1Q8NFP4 955 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 GOLGA5Q8TBA6 731 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 TAS1R2Q8TE23 839 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 TMEM174Q8WUU8 243 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 ERLEC1Q96DZ1 483 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 EEF2KMTQ96G04 330 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 SMARCD1Q96GM5 515 aa12.12□□□□□ -0.47
CPNE3-210ENST00000621245 ZC3H10Q96K80 434 aaKnown RBP12.12□□□□□ -0.47
CPNE3-210ENST00000621245 SPATA32Q96LK8 384 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms