RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 RTN2O75298 545 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 FTLP02792 175 aaPredicted RBP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 GJA1P17302 382 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 CDC25CP30307 473 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 TFF2Q03403 129 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 GFPT1Q06210 699 aaPredicted RBP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 C1QBPQ07021 282 aaKnown RBP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 CBX2Q14781 532 aaPredicted RBP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 POTEHQ6S545 545 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 XYLT1Q86Y38 959 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 DNAAF5Q86Y56 855 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 MCOLN2Q8IZK6 566 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 PDZD8Q8NEN9 1154 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 PIWIL1Q96J94 861 aaKnown RBP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 NECTIN4Q96NY8 510 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 BAG1Q99933 345 aaPredicted RBP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 OSER1Q9NX31 292 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 ADAM22Q9P0K1 906 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 TMCO5BA8MYB1 307 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 FSHRP23945 695 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 PPP1R2P3Q6NXS1 205 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 ALKBH5Q6P6C2 394 aaKnown RBP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 OLFML1Q6UWY5 402 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 FAM183BPQ6ZVS7 135 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 MSANTD4Q8NCY6 345 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 IPO4Q8TEX9 1081 aaKnown RBP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 KHSRPQ92945 711 aaKnown RBP eCLIP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 VCPIP1Q96JH7 1222 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 C11orf70Q9BRQ4 267 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 SYNCQ9H7C4 482 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 TRPM5Q9NZQ8 1165 aa23.81■■□□□ 1.4
CBWD3-213ENST00000618217 MRPS23Q9Y3D9 190 aaKnown RBP23.81■■□□□ 1.4
CBWD3-213ENST00000618217 A0A1W2PQH9 124 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 SOWAHDA6NJG2 315 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 ZNF263O14978 683 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 AKR1B10O60218 316 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 ZNF268Q14587 947 aaPredicted RBP23.8■■□□□ 1.4
CBWD3-213ENST00000618217 HFE2Q6ZVN8 426 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 ZDHHC17Q8IUH5 632 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 CCDC170Q8IYT3 715 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 MCRS1Q96EZ8 462 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 ATXN3LQ9H3M9 355 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 DEF6Q9H4E7 631 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 TLR8Q9NR97 1041 aaKnown RBP23.8■■□□□ 1.4
CBWD3-213ENST00000618217 SPTLC3Q9NUV7 552 aa23.8■■□□□ 1.4
CBWD3-213ENST00000618217 CEBPBP17676 345 aa23.79■■□□□ 1.4
CBWD3-213ENST00000618217 GSCP56915 257 aaPredicted RBP23.79■■□□□ 1.4
CBWD3-213ENST00000618217 SLC6A3Q01959 620 aa23.79■■□□□ 1.4
CBWD3-213ENST00000618217 TAF5Q15542 800 aa23.79■■□□□ 1.4
CBWD3-213ENST00000618217 TEAD2Q15562 447 aa23.79■■□□□ 1.4
CBWD3-213ENST00000618217 OR6B2Q6IFH4 312 aa23.79■■□□□ 1.4
CBWD3-213ENST00000618217 LRRC8AQ8IWT6 810 aa23.79■■□□□ 1.4
CBWD3-213ENST00000618217 CLIC5Q9NZA1 410 aa23.79■■□□□ 1.4
CBWD3-213ENST00000618217 TCRBV5S1A1TA0A578 114 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 SART1O43290 800 aaKnown RBP23.78■■□□□ 1.4
CBWD3-213ENST00000618217 LCA5LO95447 670 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 CALB1P05937 261 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 FYNP06241 537 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 SCNN1AP37088 669 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 PSEN1P49768 467 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 YWHAGP61981 247 aaKnown RBP eCLIP23.78■■□□□ 1.4
CBWD3-213ENST00000618217 CYP4F8P98187 520 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 CCDC122Q5T0U0 273 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 STXBP5Q5T5C0 1151 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 BSPRYQ5W0U4 402 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 RAD9BQ6WBX8 426 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 ARHGAP18Q8N392 663 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 ZNF276Q8N554 614 aa23.78■■□□□ 1.4
CBWD3-213ENST00000618217 C2orf78A6NCI8 922 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 OAS1P00973 400 aaKnown RBP23.77■■□□□ 1.4
CBWD3-213ENST00000618217 MTF1Q14872 753 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 SMAD2Q15796 467 aaKnown RBP23.77■■□□□ 1.4
CBWD3-213ENST00000618217 TXNDC8Q6A555 127 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 SLC26A9Q7LBE3 791 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 NPAS3Q8IXF0 933 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 ING5Q8WYH8 240 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 MRPS31Q92665 395 aaKnown RBP23.77■■□□□ 1.4
CBWD3-213ENST00000618217 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.77■■□□□ 1.4
CBWD3-213ENST00000618217 STRIP2Q9ULQ0 834 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 SOBPA7XYQ1 873 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 LTFP02788 710 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 GLI1P08151 1106 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 TUBP50607 506 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 PUS10Q3MIT2 529 aaKnown RBP23.77■■□□□ 1.4
CBWD3-213ENST00000618217 EFHC1Q5JVL4 640 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 PTCRAQ6ISU1 281 aaPredicted RBP23.77■■□□□ 1.4
CBWD3-213ENST00000618217 FGF13Q92913 245 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 ZSWIM3Q96MP5 696 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 GCNAQ96QF7 691 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 PPP1R9BQ96SB3 815 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 SLC46A2Q9BY10 475 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 ASNSD1Q9NWL6 643 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.77■■□□□ 1.4
CBWD3-213ENST00000618217 WDR35Q9P2L0 1181 aa23.77■■□□□ 1.4
CBWD3-213ENST00000618217 EPN1Q9Y6I3 576 aaPredicted RBP23.77■■□□□ 1.4
CBWD3-213ENST00000618217 RRM1P23921 792 aa23.76■■□□□ 1.39
CBWD3-213ENST00000618217 YWHAZP63104 245 aaKnown RBP23.76■■□□□ 1.39
CBWD3-213ENST00000618217 TOGARAM2Q6ZUX3 1019 aa23.76■■□□□ 1.39
CBWD3-213ENST00000618217 BEND5Q7L4P6 421 aa23.76■■□□□ 1.39
CBWD3-213ENST00000618217 PHLDB2Q86SQ0 1253 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms