RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 SNRPAP09012 282 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 PDK2Q15119 407 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 PIP4K2CQ8TBX8 421 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 SGF29Q96ES7 293 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 PGLYRP2Q96PD5 576 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 TTC1Q99614 292 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 ATRNL1Q5VV63 1379 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 KBTBD13C9JR72 458 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 TRUB2O95900 331 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 CFHP08603 1231 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 XPAP23025 273 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 RPA3P35244 121 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 GLRBP48167 497 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 JOSD2Q8TAC2 188 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 GOLGA2P5Q9HBQ8 144 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 GOLGA8TH3BQL2 631 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 ZNF862O60290 1169 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 POLBP06746 335 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 THP07101 528 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 GHRP10912 638 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 GCKP35557 465 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 PAPOLAP51003 745 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 EML3Q32P44 896 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 USP6NLQ92738 828 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 ART4Q93070 314 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 SPDL1Q96EA4 605 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 SGSM3Q96HU1 749 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 INPP4AQ96PE3 977 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 MUC3BQ9H195 1237 aa9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 R3HDM2Q9Y2K5 976 aaKnown RBP9.26□□□□□ -0.93
PDLIM5-222ENST00000615540 KLRG2A4D1S0 409 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 E5RI56 91 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 AVILO75366 819 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 RBL1P28749 1068 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 LRRC36Q1X8D7 754 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 BOLA3Q53S33 107 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 SPATA24Q86W54 205 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 MIB1Q86YT6 1006 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 DAW1Q8N136 415 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 LRRC57Q8N9N7 239 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 GRAMD1AQ96CP6 724 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 ZCWPW1Q9H0M4 648 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 AVENQ9NQS1 362 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 ANLNQ9NQW6 1124 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 ARHGEF38Q9NXL2 777 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 MYO5AQ9Y4I1 1855 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 GPR182O15218 404 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 HOXD10P28358 340 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 PGM1P36871 562 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 SLC6A3Q01959 620 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 SREBF2Q12772 1141 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 GRAMD1BQ3KR37 738 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 MAP3K21Q5TCX8 1036 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 DEFB106AQ8N104 65 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 C3orf20Q8ND61 904 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 MBOAT7Q96N66 472 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 GCNAQ96QF7 691 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 CYP3A43Q9HB55 503 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 APOBEC3GQ9HC16 384 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 ABCA3Q99758 1704 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 DCDC2CA8MYV0 355 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 LUC7L3O95232 432 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 CD302Q8IX05 232 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 KAT2BQ92831 832 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 E2F7Q96AV8 911 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 ADA2Q9NZK5 511 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 SENP1Q9P0U3 644 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 MAFBQ9Y5Q3 323 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 GLI3P10071 1580 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 GSTA4O15217 222 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 MYL2P10916 166 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 MGAT1P26572 445 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 HNRNPH1P31943 449 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 RBBP5Q15291 538 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 FSCN1Q16658 493 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 PPP1R26Q5T8A7 1209 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 TTC27Q6P3X3 843 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 RIBC1Q8N443 379 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 MTMR14Q8NCE2 650 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 SLC26A7Q8TE54 656 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 FICDQ9BVA6 458 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 ATP5HO75947 161 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 TGM2P21980 687 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 DCAF12L1Q5VU92 463 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 DUPD1Q68J44 220 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 LRRC43Q8N309 656 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 TMEM237Q96Q45 408 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 BCAP29Q9UHQ4 241 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 NR2E1Q9Y466 385 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 USH1CQ9Y6N9 552 aa9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 TNRC6CQ9HCJ0 1690 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-222ENST00000615540 VNN1O95497 513 aa9.24□□□□□ -0.93
PDLIM5-222ENST00000615540 PCSK1P29120 753 aa9.24□□□□□ -0.93
PDLIM5-222ENST00000615540 ZNF280AP59817 542 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-222ENST00000615540 EFEMP1Q12805 493 aa9.24□□□□□ -0.93
PDLIM5-222ENST00000615540 ZNF268Q14587 947 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-222ENST00000615540 TAF5Q15542 800 aa9.24□□□□□ -0.93
PDLIM5-222ENST00000615540 WSCD1Q658N2 575 aa9.24□□□□□ -0.93
PDLIM5-222ENST00000615540 ALLCQ8N6M5 410 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms