RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 GPR20Q99678 358 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 PABPC3Q9H361 631 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TJP2Q9UDY2 1190 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TBK1Q9UHD2 729 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 LRCH1Q9Y2L9 728 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 RARGP13631 454 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 BRAFP15056 766 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 GSTT1P30711 240 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TUBA1BP68363 451 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 GRAMD1BQ3KR37 738 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 WLSQ5T9L3 541 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TTC39BQ5VTQ0 682 aaPredicted RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TDRD10Q5VZ19 366 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 JADE1Q6IE81 842 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 WDR59Q6PJI9 974 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TUBA1AQ71U36 451 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TTC8Q8TAM2 541 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 CALML6Q8TD86 181 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TATDN2Q93075 761 aa9.04□□□□□ -0.96
PDE6A-204ENST00000613228 POP1Q99575 1024 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 MRPL9Q9BYD2 267 aaKnown RBP9.04□□□□□ -0.96
PDE6A-204ENST00000613228 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 ATMINO43313 823 aaPredicted RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 TSPAN9O75954 239 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 TSHRP16473 764 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 CNTFP26441 200 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 UBA3Q8TBC4 463 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 ZNF606Q8WXB4 792 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 LSM7Q9UK45 103 aaKnown RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 TTC7AQ9ULT0 858 aaPredicted RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 TRIM33Q9UPN9 1127 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 NFKBIEO00221 500 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 CST8O60676 142 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 PYGLP06737 847 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 CTSHP09668 335 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 EPHB1P54762 984 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 RPL10AP62906 217 aaKnown RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 MRPS15P82914 257 aaKnown RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 PPP3CAQ08209 521 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 DCTN2Q13561 401 aaKnown RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 NOP9Q86U38 636 aaKnown RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 MAB21L3Q8N8X9 362 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 SPATA18Q8TC71 538 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 TRIM63Q969Q1 353 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 LENG1Q96BZ8 264 aaPredicted RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 THAP11Q96EK4 314 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 LRGUKQ96M69 825 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 ANKZF1Q9H8Y5 726 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 PCDH9Q9HC56 1237 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 OLA1Q9NTK5 396 aaKnown RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 GALNT8Q9NY28 637 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 ANXA9O76027 345 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 CHEK2O96017 543 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 EIF2B2P49770 351 aaKnown RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 PLD1Q13393 1074 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 TRADDQ15628 312 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 DUSP28Q4G0W2 176 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 ZNF280DQ6N043 979 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 TMEM110Q86TL2 294 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 EPS8L1Q8TE68 723 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 MTBPQ96DY7 904 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 NAT9Q9BTE0 207 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 DCLK3Q9C098 648 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 SETD4Q9NVD3 440 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 ARHGAP28Q9P2N2 729 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 H2AFYO75367 372 aaKnown RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 MICAL2O94851 1124 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 PDGFRBP09619 1106 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 RRM1P23921 792 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 PMLP29590 882 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 CRYBB1P53674 252 aaPredicted RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 JAM2P57087 298 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 ZNF200P98182 395 aaPredicted RBP9.03□□□□□ -0.96
PDE6A-204ENST00000613228 TMEM62Q0P6H9 643 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 NAB1Q13506 487 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 KRT72Q14CN4 511 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 KIZQ2M2Z5 673 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 ZACNQ401N2 412 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 CCDC153Q494R4 210 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 CYP4A22Q5TCH4 519 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 NAPEPLDQ6IQ20 393 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 RGMBQ6NW40 437 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 AMIGO3Q86WK7 504 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 IRF2BP1Q8IU81 584 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 GALNT15Q8N3T1 639 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 SH2D3CQ8N5H7 860 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 LRRC52Q8N7C0 313 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 NDNQ99608 321 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 TLR10Q9BXR5 811 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 PRELID1Q9Y255 219 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 SNCAIPQ9Y6H5 919 aa9.03□□□□□ -0.96
PDE6A-204ENST00000613228 C4AP0C0L4 1744 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 BCORQ6W2J9 1755 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 TBKBP1A7MCY6 615 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 B4GALT4O60513 344 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 GPC4O75487 556 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 SMIM10L2AP0DMW4 78 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 SMIM10L2BP0DMW5 78 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 FGFR4P22455 802 aa9.02□□□□□ -0.96
PDE6A-204ENST00000613228 SEC24CP53992 1094 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms