RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 CCL26Q9Y258 94 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 NEUROG3Q9Y4Z2 214 aa14.46□□□□□ -0.09
CTSA-218ENST00000607814 ASCC3Q8N3C0 2202 aaKnown RBP14.45□□□□□ -0.1
CTSA-218ENST00000607814 OTOL1A6NHN0 477 aaPredicted RBP14.45□□□□□ -0.1
CTSA-218ENST00000607814 NOL4O94818 638 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 CSH1P0DML2 217 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 CSH2P0DML3 217 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 CCDC130P13994 396 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 NOP14P78316 857 aaKnown RBP14.45□□□□□ -0.1
CTSA-218ENST00000607814 FKBP3Q00688 224 aaKnown RBP14.45□□□□□ -0.1
CTSA-218ENST00000607814 DMC1Q14565 340 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 ZNF268Q14587 947 aaPredicted RBP14.45□□□□□ -0.1
CTSA-218ENST00000607814 USP39Q53GS9 565 aaKnown RBP14.45□□□□□ -0.1
CTSA-218ENST00000607814 PMS2CLQ68D20 193 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 CC2D1AQ6P1N0 951 aaPredicted RBP14.45□□□□□ -0.1
CTSA-218ENST00000607814 IGSF10Q6WRI0 2623 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 PAQR9Q6ZVX9 377 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 ELOA2Q8IYF1 753 aaPredicted RBP14.45□□□□□ -0.1
CTSA-218ENST00000607814 C12orf29Q8N999 325 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 RPLP0P6Q8NHW5 317 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 ZCCHC14Q8WYQ9 949 aaKnown RBP14.45□□□□□ -0.1
CTSA-218ENST00000607814 TATDN2Q93075 761 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 SLC22A12Q96S37 553 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 TMEM8AQ9HCN3 771 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 TDP1Q9NUW8 608 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 PCNX2A6NKB5 2137 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 ABCA7Q8IZY2 2146 aa14.45□□□□□ -0.1
CTSA-218ENST00000607814 CACNA1EQ15878 2313 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 FLNBO75369 2602 aaKnown RBP14.44□□□□□ -0.1
CTSA-218ENST00000607814 CDX4O14627 284 aaPredicted RBP14.44□□□□□ -0.1
CTSA-218ENST00000607814 PSMA7O14818 248 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 BEST1O76090 585 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 SPINK2P20155 84 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 GBP1P32455 592 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 MXI1P50539 228 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 GALK1P51570 392 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 LMAN2Q12907 356 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 LRMPQ12912 555 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 STIM1Q13586 685 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 MAPRE1Q15691 268 aaKnown RBP14.44□□□□□ -0.1
CTSA-218ENST00000607814 ZNF394Q53GI3 561 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 COBLL1Q53SF7 1204 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 KRT39Q6A163 491 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 TTI2Q6NXR4 508 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 RIN3Q8TB24 985 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 USP13Q92995 863 aaPredicted RBP14.44□□□□□ -0.1
CTSA-218ENST00000607814 DHTKD1Q96HY7 919 aaPredicted RBP14.44□□□□□ -0.1
CTSA-218ENST00000607814 FUBP3Q96I24 572 aaKnown RBP eCLIP14.44□□□□□ -0.1
CTSA-218ENST00000607814 ARID3AQ99856 593 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 FBRSL1Q9HCM7 1045 aaKnown RBP14.44□□□□□ -0.1
CTSA-218ENST00000607814 EVLQ9UI08 416 aaPredicted RBP14.44□□□□□ -0.1
CTSA-218ENST00000607814 LHX6Q9UPM6 363 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 MSRB2Q9Y3D2 182 aa14.44□□□□□ -0.1
CTSA-218ENST00000607814 C2orf78A6NCI8 922 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 DCLK1O15075 740 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 ABL1P00519 1130 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 FAM163BP0C2L3 166 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 ANXA13P27216 316 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 ADORA2BP29275 332 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 GJA4P35212 333 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 MAGEA11P43364 429 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 RING1Q06587 406 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 TRIM68Q6AZZ1 485 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 VSTM1Q6UX27 236 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 CYP2U1Q7Z449 544 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 FAM35AQ86V20 835 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 ZC3H3Q8IXZ2 948 aaKnown RBP14.43□□□□□ -0.1
CTSA-218ENST00000607814 CPA6Q8N4T0 437 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 ARL14EPQ8N8R7 260 aaPredicted RBP14.43□□□□□ -0.1
CTSA-218ENST00000607814 SLC2A14Q8TDB8 520 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 WHAMMQ8TF30 809 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 TAF4BQ92750 862 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 JAKMIP2Q96AA8 810 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 SLC32A1Q9H598 525 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 KIAA1468Q9P260 1216 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 LOC400499M0QZD8 3231 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 DENND4CQ5VZ89 1909 aa14.43□□□□□ -0.1
CTSA-218ENST00000607814 P4HA1P13674 534 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 DGKEP52429 567 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 LRRC63Q05C16 580 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 CCDC40Q4G0X9 1142 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 DENND5BQ6ZUT9 1274 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 MON1AQ86VX9 555 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 RASSF3Q86WH2 238 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 CREBRFQ8IUR6 639 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 FUKQ8N0W3 1084 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 TSTD1Q8NFU3 115 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 SCAMP5Q8TAC9 235 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 MRPS31Q92665 395 aaKnown RBP14.42□□□□□ -0.1
CTSA-218ENST00000607814 CD101Q93033 1021 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 ATP2A3Q93084 1043 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 IMPG2Q9BZV3 1241 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 ELOVL4Q9GZR5 314 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 NIF3L1Q9GZT8 377 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 ECT2Q9H8V3 914 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 RAB20Q9NX57 234 aa14.42□□□□□ -0.1
CTSA-218ENST00000607814 ARMCX3Q9UH62 379 aaPredicted RBP14.42□□□□□ -0.1
CTSA-218ENST00000607814 CHORDC1Q9UHD1 332 aaPredicted RBP14.42□□□□□ -0.1
CTSA-218ENST00000607814 ZNF638Q14966 1978 aaKnown RBP14.42□□□□□ -0.1
CTSA-218ENST00000607814 UPK3BL1B0FP48 263 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms