RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 RFFLQ8WZ73 363 aa11.14□□□□□ -0.63
LINC01001-203ENST00000607448 LRRC45Q96CN5 670 aa11.14□□□□□ -0.63
LINC01001-203ENST00000607448 MFSD14AQ96MC6 490 aa11.14□□□□□ -0.63
LINC01001-203ENST00000607448 NAP1L3Q99457 506 aaPredicted RBP11.14□□□□□ -0.63
LINC01001-203ENST00000607448 CAPS2Q9BXY5 557 aa11.14□□□□□ -0.63
LINC01001-203ENST00000607448 APEX2Q9UBZ4 518 aa11.14□□□□□ -0.63
LINC01001-203ENST00000607448 DNAJC12Q9UKB3 198 aa11.14□□□□□ -0.63
LINC01001-203ENST00000607448 AMFRQ9UKV5 643 aa11.14□□□□□ -0.63
LINC01001-203ENST00000607448 NFU1Q9UMS0 254 aa11.14□□□□□ -0.63
LINC01001-203ENST00000607448 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.14□□□□□ -0.63
LINC01001-203ENST00000607448 ZNF638Q14966 1978 aaKnown RBP11.13□□□□□ -0.63
LINC01001-203ENST00000607448 ANAPC1Q9H1A4 1944 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 KRBA1A5PL33 1030 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 RAD51CO43502 376 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 MOSPD3O75425 235 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 KRT19P08727 400 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 NPR3P17342 541 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 PTPN2P17706 415 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 HADHBP55084 474 aaKnown RBP11.13□□□□□ -0.63
LINC01001-203ENST00000607448 BFSP1Q12934 665 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 DRAP1Q14919 205 aaPredicted RBP11.13□□□□□ -0.63
LINC01001-203ENST00000607448 TCEAL1Q15170 157 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 SNRNP35Q16560 246 aaKnown RBP11.13□□□□□ -0.63
LINC01001-203ENST00000607448 SV2CQ496J9 727 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 SLC39A12Q504Y0 691 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 CWF19L1Q69YN2 538 aaKnown RBP11.13□□□□□ -0.63
LINC01001-203ENST00000607448 INTS8Q75QN2 995 aaKnown RBP11.13□□□□□ -0.63
LINC01001-203ENST00000607448 RTL10Q7L3V2 364 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 MAATS1Q7Z4T9 603 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 PLEKHO2Q8TD55 490 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 GPR152Q8TDT2 470 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 MCRS1Q96EZ8 462 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 HES6Q96HZ4 224 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 ZIM3Q96PE6 472 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 KXD1Q9BQD3 176 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 SYT11Q9BT88 431 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 ZCWPW1Q9H0M4 648 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 TMLHEQ9NVH6 421 aa11.13□□□□□ -0.63
LINC01001-203ENST00000607448 AJAP1Q9UKB5 411 aaPredicted RBP11.13□□□□□ -0.63
LINC01001-203ENST00000607448 RRP15Q9Y3B9 282 aaKnown RBP11.13□□□□□ -0.63
LINC01001-203ENST00000607448 MRPS23Q9Y3D9 190 aaKnown RBP11.13□□□□□ -0.63
LINC01001-203ENST00000607448 ZNF233A6NK53 670 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 OR6C75A6NL08 312 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 SRRM3A6NNA2 597 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-203ENST00000607448 TMCO5BA8MYB1 307 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 HMGB1P1B2RPK0 211 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-203ENST00000607448 PMM2O15305 246 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 EXOC3O60645 756 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 TMEM191BP0C7N4 346 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 TNFAIP3P21580 790 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 IRAK1P51617 712 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 GALCP54803 685 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 NT5DC3Q86UY8 548 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 TMC8Q8IU68 726 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 SUGP1Q8IWZ8 645 aaKnown RBP11.12□□□□□ -0.63
LINC01001-203ENST00000607448 SIX5Q8N196 739 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 TMEM105Q8N8V8 129 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 STKLD1Q8NE28 680 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 IFT81Q8WYA0 676 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 CTNNBL1Q8WYA6 563 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-203ENST00000607448 ZNF516Q92618 1163 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 ZSWIM3Q96MP5 696 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 ZNF560Q96MR9 790 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 LPIN3Q9BQK8 851 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 LRRC3Q9BY71 257 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 PLA2G2FQ9BZM2 168 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 ITGA11Q9UKX5 1188 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 CA14Q9ULX7 337 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 PACSIN2Q9UNF0 486 aaPredicted RBP11.12□□□□□ -0.63
LINC01001-203ENST00000607448 PATJQ8NI35 1801 aa11.12□□□□□ -0.63
LINC01001-203ENST00000607448 KIAA0391O15091 583 aaKnown RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 PI15O43692 258 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 CST3P01034 146 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 DLATP10515 647 aaKnown RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 SRFP11831 508 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 ATF6P18850 670 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 FCARP24071 287 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 ACAT1P24752 427 aaKnown RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 AVPR2P30518 371 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 PLA2G5P39877 138 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 DNA2P51530 1060 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 MCCD1P59942 119 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 GPC5P78333 572 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 CYP24A1Q07973 514 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 TCF15Q12870 199 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 DNAJC21Q5F1R6 531 aaKnown RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 SPDYCQ5MJ68 293 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 STXBP5Q5T5C0 1151 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 GJB7Q6PEY0 223 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 KDM7AQ6ZMT4 941 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 PDZD4Q76G19 769 aaPredicted RBP11.11□□□□□ -0.63
LINC01001-203ENST00000607448 DAAM2Q86T65 1068 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 RHOT2Q8IXI1 618 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 KLHL7Q8IXQ5 586 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 LRRC52Q8N7C0 313 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 XXYLT1Q8NBI6 393 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 ELMO3Q96BJ8 720 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 CCDC127Q96BQ5 260 aa11.11□□□□□ -0.63
LINC01001-203ENST00000607448 ANKRD36BP1Q96IX9 119 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms