RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	VPS50	Q96JG6	964 aa		12.19	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	PLEKHG4B	Q96PX9	1271 aa		12.19	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	PIDD1	Q9HB75	910 aa		12.19	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	DNAJC17	Q9NVM6	304 aa	Known RBP	12.19	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	ASNSD1	Q9NWL6	643 aa		12.19	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	POLL	Q9UGP5	575 aa		12.19	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	KIAA1257	Q9ULG3	409 aa		12.19	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	JAG2	Q9Y219	1238 aa		12.19	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	WDR37	Q9Y2I8	494 aa		12.19	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	LY75	O60449	1722 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	FAM159B	A6NKW6	160 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	C3orf70	A6NLC5	250 aa	Predicted RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	AP3B1	O00203	1094 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	SLC16A4	O15374	487 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	ZSCAN9	O15535	394 aa	Predicted RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	PFDN1	O60925	122 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	IFNB1	P01574	187 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	APOE	P02649	317 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	ENO1	P06733	434 aa	Known RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	PYGB	P11216	843 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	CD58	P19256	250 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	MX2	P20592	715 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	BGN	P21810	368 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	KDELR1	P24390	212 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	DSG3	P32926	999 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	RANBP1	P43487	201 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	NR2C2	P49116	596 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	NUMB	P49757	651 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	AQP5	P55064	265 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	HDAC4	P56524	1084 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	HPCA	P84074	193 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	OTUD4	Q01804	1114 aa	Known RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	PPARD	Q03181	441 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	SF3A3	Q12874	501 aa	Known RBP eCLIP	12.18	□□□□□ -0.46	6e-15	■■■■■ 122.1
U2AF1L4-221	ENST00000601236	PPIL2	Q13356	520 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	FASTKD3	Q14CZ7	662 aa	Known RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	NOMO1	Q15155	1222 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	STIL	Q15468	1287 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	TKFC	Q3LXA3	575 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	BOLA3	Q53S33	107 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	ZPBP2	Q6X784	338 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	WDR49	Q8IV35	697 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	ARID3B	Q8IVW6	561 aa	Predicted RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	KBTBD2	Q8IY47	623 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	PQLC1	Q8N2U9	271 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	CYP2W1	Q8TAV3	490 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	RDH11	Q8TC12	318 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	GDPD5	Q8WTR4	605 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	ZNF606	Q8WXB4	792 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	SLC7A3	Q8WY07	619 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	LPAR1	Q92633	364 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	RILP	Q96NA2	401 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	ACAP3	Q96P50	834 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	MPHOSPH6	Q99547	160 aa	Known RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	EIF2B3	Q9NR50	452 aa	Known RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	HOMER2	Q9NSB8	354 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	BTBD7	Q9P203	1132 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	SLC17A7	Q9P2U7	560 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	EPS15L1	Q9UBC2	864 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	SLC9A2	Q9UBY0	812 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	DTNA	Q9Y4J8	743 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	TELO2	Q9Y4R8	837 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	PCDHA10	Q9Y5I2	948 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	AK5	Q9Y6K8	562 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	IVNS1ABP	Q9Y6Y0	642 aa		12.18	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	TRIM49D1	C9J1S8	452 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	GPR25	O00155	361 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	PPEF1	O14829	653 aa	Predicted RBP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	GAS2	O43903	313 aa	Known RBP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	RNASEH1	O60930	286 aa	Known RBP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	ALDH1A2	O94788	518 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	BAG2	O95816	211 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	FAM58BP	P0C7Q3	252 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	UBTFL6	P0CB48	400 aa	Predicted RBP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	AR	P10275	920 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	OSBP	P22059	807 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	AMPD1	P23109	780 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	DNAJB2	P25686	324 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	POLD1	P28340	1107 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	SSTR1	P30872	391 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	HOXA13	P31271	388 aa	Predicted RBP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	GARS	P41250	739 aa	Known RBP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	MAGEA3	P43357	314 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	NAMPT	P43490	491 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	HARS2	P49590	506 aa	Known RBP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	LIG4	P49917	911 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	EIF3E	P60228	445 aa	Known RBP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	SLC25A11	Q02978	314 aa	Known RBP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	MTMR1	Q13613	665 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	BBS9	Q3SYG4	887 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	XKR9	Q5GH70	373 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	RABGAP1L	Q5R372	815 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	FAM102B	Q5T8I3	360 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	LINC00299	Q6ZSB3	139 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	ARPIN	Q7Z6K5	226 aa		12.17	□□□□□ -0.46
U2AF1L4-221	ENST00000601236	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms