RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 RAD51CO43502 376 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 USP17L7P0C7H9 530 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 LAG3P18627 525 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 KDELR1P24390 212 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 GPR17Q13304 367 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 TFDP3Q5H9I0 405 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 FBXO38Q6PIJ6 1188 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 TEKT4Q8WW24 435 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 MAGOHBQ96A72 148 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 C8orf48Q96LL4 319 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 RUNDC3BQ96NL0 473 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 HOMER3Q9NSC5 361 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 STIM2Q9P246 746 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 DMGDHQ9UI17 866 aaKnown RBP18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 STAP1Q9ULZ2 295 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 COL4A6Q14031 1691 aa18.45■□□□□ 0.54
SHKBP1-224ENST00000600718 CCDC151A5D8V7 595 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 TRIM66O15016 1216 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 TJP3O95049 919 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 CDKN2BP42772 138 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 HDAC4P56524 1084 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 SLC7A5Q01650 507 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 FPGSQ05932 587 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 KLF1Q13351 362 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 SMTNL2Q2TAL5 461 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 DCAF6Q58WW2 860 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 KCNT1Q5JUK3 1230 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 SCYL2Q6P3W7 929 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 TMCO2Q7Z6W1 182 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 RNF168Q8IYW5 571 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 C12orf50Q8NA57 414 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 KCTD6Q8NC69 237 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 BADQ92934 168 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 NT5C3BQ969T7 300 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 PEBP4Q96S96 227 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 TBCBQ99426 244 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 HEMGNQ9BXL5 484 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 LRRC19Q9H756 370 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 C3orf70A6NLC5 250 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 YJEFN3A6XGL0 299 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 E7ENQ6 273 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 ENDOD1O94919 500 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 LTFP02788 710 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 VSNL1P62760 191 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 LLGL1Q15334 1064 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 TAZQ16635 292 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 RAB6CQ53S08 254 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 CYP4V2Q6ZWL3 525 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 ANKS1BQ7Z6G8 1248 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 SCN4BQ8IWT1 228 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 SLC39A11Q8N1S5 342 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 C2orf15Q8WU43 125 aaKnown RBP18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 ACSF2Q96CM8 615 aaPredicted RBP18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 YME1L1Q96TA2 773 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 NPY6RQ99463 290 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 HERPUD2Q9BSE4 406 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 TRIM62Q9BVG3 475 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 RAB6CQ9H0N0 254 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 CHST7Q9NS84 486 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 RRN3Q9NYV6 651 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 AMACRQ9UHK6 382 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 BACE2Q9Y5Z0 518 aa18.44■□□□□ 0.54
SHKBP1-224ENST00000600718 KIAA0100Q14667 2235 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 hCG_1818297A0A087WSY0 165 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 TNFRSF10BO14763 440 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 CAPN9O14815 690 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 CPB1P15086 417 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 TFE3P19532 575 aaPredicted RBP18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 SULT1E1P49888 294 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 MRPS25P82663 173 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 DHX34Q14147 1143 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 HFE2Q6ZVN8 426 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 ZNF365Q70YC5 407 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 BHLHA9Q7RTU4 235 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 SPPL2BQ8TCT7 592 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 PIK3R5Q8WYR1 880 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 HSPH1Q92598 858 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 SPG21Q9NZD8 308 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 MTRRQ9UBK8 725 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 PCYOX1Q9UHG3 505 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 MRPL42Q9Y6G3 142 aaKnown RBP18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 NLRC5Q86WI3 1866 aa18.43■□□□□ 0.54
SHKBP1-224ENST00000600718 ZBBXA8MT70 800 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 ERLIN1O75477 346 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 HEXIM1O94992 359 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 FYNP06241 537 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 FNTAP49354 379 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 ARPP19P56211 112 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 KIAA1841Q6NSI8 718 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 RSPO2Q6UXX9 243 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 ZNF771Q7L3S4 317 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 BEND5Q7L4P6 421 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 BNIPLQ7Z465 357 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 MAP7D3Q8IWC1 876 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 IFT20Q8IY31 132 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 COLGALT1Q8NBJ5 622 aa18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 HNRNPLLQ8WVV9 542 aaKnown RBP18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 RIN2Q8WYP3 895 aaPredicted RBP18.42■□□□□ 0.54
SHKBP1-224ENST00000600718 TMEM169Q96HH4 297 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms