RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ANO4Q32M45 955 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 HYIQ5T013 277 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 BTBD8Q5XKL5 378 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 DHRS13Q6UX07 377 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 DBX2Q6ZNG2 339 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 ADGRF2Q8IZF7 708 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 C1orf127Q8N9H9 656 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 TERB1Q8NA31 727 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 ZSWIM2Q8NEG5 633 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 KCNV2Q8TDN2 545 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 DNASE2BQ8WZ79 361 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 KCNN1Q92952 543 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 MYLPFQ96A32 169 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 TOE1Q96GM8 510 aaKnown RBP14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 FUBP3Q96I24 572 aaKnown RBP eCLIP14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 CDC6Q99741 560 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 GPR174Q9BXC1 333 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 ZHX3Q9H4I2 956 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 PTPRQQ9UMZ3 2332 aa14.65□□□□□ -0.06
SHKBP1-208ENST00000595726 MEI4A8MW99 385 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 KCNK3O14649 394 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 GABRDO14764 452 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 TLX3O43711 291 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 TRAK2O60296 914 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 BMP15O95972 392 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 PDGFRBP09619 1106 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 PFKLP17858 780 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 CD6P30203 668 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 CYP27A1Q02318 531 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 IFRD2Q12894 506 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 TAF10Q12962 218 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 SF3A1Q15459 793 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 SMAD1Q15797 465 aaKnown RBP14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 SOWAHAQ2M3V2 549 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 SDE2Q6IQ49 451 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 BBS7Q8IWZ6 715 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 TMEM86AQ8N2M4 240 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 CSGALNACT2Q8N6G5 542 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 KIAA1958Q8N8K9 716 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 CXorf38Q8TB03 319 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 FCRL3Q96P31 734 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 FIZ1Q96SL8 496 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 TTLL2Q9BWV7 592 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 TRIM9Q9C026 710 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 CRTAC1Q9NQ79 661 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 TBC1D14Q9P2M4 693 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 MTMR6Q9Y217 621 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 STARD13Q9Y3M8 1113 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 SLCO1B1Q9Y6L6 691 aa14.64□□□□□ -0.07
SHKBP1-208ENST00000595726 SPTA1P02549 2419 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 A0A1B0GVT2 93 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 E2F8A0AVK6 867 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 PRRT4C9JH25 899 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 F8VP50 259 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 HOXC11O43248 304 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 FAM13AO94988 1023 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 ZNF883P0CG24 379 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 NCAM1P13591 858 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 PCSK1P29120 753 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 LHX1P48742 406 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 CACNA2D1P54289 1103 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 SEMG2Q02383 582 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 GRIN1Q05586 938 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 PCSK4Q6UW60 755 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 C4orf50Q6ZRC1 276 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 GPBP1Q86WP2 473 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 HSCBQ8IWL3 235 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 ZFRQ96KR1 1074 aaKnown RBP14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 AK8Q96MA6 479 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 SYT15Q9BQS2 421 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 SPHK2Q9NRA0 654 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 GDAP2Q9NXN4 497 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 WSB2Q9NYS7 404 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 KCND2Q9NZV8 630 aa14.63□□□□□ -0.07
SHKBP1-208ENST00000595726 KCNJ18B7U540 433 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 BCAT2O15382 392 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 FLRT2O43155 660 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 COCHO43405 550 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 STX6O43752 255 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 CER1O95813 267 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 KRT19P08727 400 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 HLA-EP13747 358 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 ANXA13P27216 316 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 ADSSP30520 456 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 CSNK1EP49674 416 aaKnown RBP14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 ZNF131P52739 623 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 GTF2BQ00403 316 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 PTPRNQ16849 979 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 TMEM119Q4V9L6 283 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 DCAF12L1Q5VU92 463 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 FAM173BQ6P4H8 233 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 VSTM1Q6UX27 236 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 KCTD17Q8N5Z5 321 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 KBTBD7Q8WVZ9 684 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 POMGNT1Q8WZA1 660 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 GABRG3Q99928 467 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 FAM213AQ9BRX8 229 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 PARVGQ9HBI0 331 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 TMEM30AQ9NV96 361 aa14.62□□□□□ -0.07
SHKBP1-208ENST00000595726 DNAJC17Q9NVM6 304 aaKnown RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms