RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 YJEFN3A6XGL0 299 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 E7ENQ6 273 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 ATMINO43313 823 aaPredicted RBP15.93■□□□□ 0.14
ATG4D-211ENST00000589753 TMEM253P0C7T8 217 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 GABRR2P28476 465 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 SCNN1AP37088 669 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 PPP3CCP48454 512 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 EPHA5P54756 1037 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 GPC5P78333 572 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 PABPC1LQ4VXU2 614 aaKnown RBP15.93■□□□□ 0.14
ATG4D-211ENST00000589753 EFHC1Q5JVL4 640 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 FAM102AQ5T9C2 384 aaPredicted RBP15.93■□□□□ 0.14
ATG4D-211ENST00000589753 CES5AQ6NT32 575 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 DNAJC24Q6P3W2 148 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 PDZD4Q76G19 769 aaPredicted RBP15.93■□□□□ 0.14
ATG4D-211ENST00000589753 BHLHA9Q7RTU4 235 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 C3orf20Q8ND61 904 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 CTNNBL1Q8WYA6 563 aaPredicted RBP15.93■□□□□ 0.14
ATG4D-211ENST00000589753 GOLGA1Q92805 767 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 PIWIL1Q96J94 861 aaKnown RBP15.93■□□□□ 0.14
ATG4D-211ENST00000589753 MSLNLQ96KJ4 702 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 GCNAQ96QF7 691 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 DESI2Q9BSY9 194 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 S1PR5Q9H228 398 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 ADAM7Q9H2U9 754 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 IL21Q9HBE4 155 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 TLR8Q9NR97 1041 aaKnown RBP15.93■□□□□ 0.14
ATG4D-211ENST00000589753 ASNSD1Q9NWL6 643 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 TRPM5Q9NZQ8 1165 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 MYO1AQ9UBC5 1043 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 INTUQ9ULD6 942 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 REXO2Q9Y3B8 237 aaKnown RBP15.93■□□□□ 0.14
ATG4D-211ENST00000589753 CDH23Q9H251 3354 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 MYO16Q9Y6X6 1858 aa15.93■□□□□ 0.14
ATG4D-211ENST00000589753 A0A1W2PQH9 124 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 LTFP02788 710 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 F11P03951 625 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 GLI1P08151 1106 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 ZDHHC11BP0C7U3 371 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 CDC25CP30307 473 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 PSEN1P49768 467 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 YWHAGP61981 247 aaKnown RBP eCLIP15.92■□□□□ 0.14
ATG4D-211ENST00000589753 NTHL1P78549 312 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 PLEKHA7Q6IQ23 1121 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 GAREM2Q75VX8 874 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 SLC26A9Q7LBE3 791 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 SCD5Q86SK9 330 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 TMEM150AQ86TG1 271 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 FAM149B1Q96BN6 582 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 TRIM62Q9BVG3 475 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 SELENOOQ9BVL4 669 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 NMUR1Q9HB89 426 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 AVENQ9NQS1 362 aaPredicted RBP15.92■□□□□ 0.14
ATG4D-211ENST00000589753 METTL5Q9NRN9 209 aaKnown RBP15.92■□□□□ 0.14
ATG4D-211ENST00000589753 PARVAQ9NVD7 372 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 SCINQ9Y6U3 715 aa15.92■□□□□ 0.14
ATG4D-211ENST00000589753 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.91■□□□□ 0.14
ATG4D-211ENST00000589753 A0A1W2PRU2 124 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 TCRBV5S1A1TA0A578 114 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 ZNF840PA6NDX5 716 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 SIGLEC16A6NMB1 481 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 ZNF197O14709 1029 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 HSF2BPO75031 334 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 TADA3O75528 432 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 GRAP2O75791 330 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 ABL1P00519 1130 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 CYP1A2P05177 515 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 KRT3P12035 628 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 CCR2P41597 374 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 PGFP49763 221 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 VAV2P52735 878 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 YWHAZP63104 245 aaKnown RBP15.91■□□□□ 0.14
ATG4D-211ENST00000589753 MAMLD1Q13495 774 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 TAF5Q15542 800 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 PRSS36Q5K4E3 855 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 ATAT1Q5SQI0 421 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 SNX30Q5VWJ9 437 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 BSPRYQ5W0U4 402 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 BTBD8Q5XKL5 378 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 HFE2Q6ZVN8 426 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 KIAA1328Q86T90 577 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 TXLNBQ8N3L3 684 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 MRPS31Q92665 395 aaKnown RBP15.91■□□□□ 0.14
ATG4D-211ENST00000589753 ARHGEF26Q96DR7 871 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 RIPOR3Q96MK2 946 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 ATXN3LQ9H3M9 355 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 UBE2ZQ9H832 354 aaPredicted RBP15.91■□□□□ 0.14
ATG4D-211ENST00000589753 POPDC2Q9HBU9 364 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 MRPL47Q9HD33 250 aaKnown RBP15.91■□□□□ 0.14
ATG4D-211ENST00000589753 ABCC13Q9NSE7 274 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 CLIC5Q9NZA1 410 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 CD207Q9UJ71 328 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 TMEM59LQ9UK28 342 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 ADGRG1Q9Y653 693 aa15.91■□□□□ 0.14
ATG4D-211ENST00000589753 ZNF638Q14966 1978 aaKnown RBP15.91■□□□□ 0.14
ATG4D-211ENST00000589753 DAB1O75553 588 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 GJB6O95452 261 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 CCDC175P0C221 793 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 RALAP11233 206 aa15.9■□□□□ 0.14
ATG4D-211ENST00000589753 RNASE9P60153 205 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms