RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 TBC1D7Q9P0N9 293 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 PCOLCE2Q9UKZ9 415 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 LAMA5O15230 3695 aa23.18■■□□□ 1.3
CAPNS1-205ENST00000588780 A0A1W2PQF6 199 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 IRF1P10914 325 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 MIB1Q86YT6 1006 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 ETFBKMTQ8IXQ9 262 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 ADAM32Q8TC27 787 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 KBTBD7Q8WVZ9 684 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 LARP4BQ92615 738 aaKnown RBP23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 C8orf48Q96LL4 319 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 ACOX2Q99424 681 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 SLC6A17Q9H1V8 727 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 SNX25Q9H3E2 840 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 SPHK2Q9NRA0 654 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 DNAJC17Q9NVM6 304 aaKnown RBP23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 SIX4Q9UIU6 781 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 KIF3AQ9Y496 699 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 RAD54BQ9Y620 910 aa23.17■■□□□ 1.3
CAPNS1-205ENST00000588780 A0A1B0GTW7 788 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 TRIM24O15164 1050 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 HOXC11O43248 304 aaPredicted RBP23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 TNNC2P02585 160 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 CCDC157Q569K6 752 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 GLRX5Q86SX6 157 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 TMEM25Q86YD3 366 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 BBS7Q8IWZ6 715 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 ZCCHC9Q8N567 271 aaKnown RBP23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 MYCBPAPQ8TBZ2 947 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 FBXO32Q969P5 355 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 DCBLD2Q96PD2 775 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 GAREM1Q9H706 876 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 CD93Q9NPY3 652 aa23.16■■□□□ 1.3
CAPNS1-205ENST00000588780 HELZ2Q9BYK8 2649 aaKnown RBP23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 LOC400499M0QZD8 3231 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 COCHO43405 550 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 GCNT3O95395 438 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 YWHAQP27348 245 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 KCNA1Q09470 495 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 TMPRSS7Q7RTY8 843 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 MARCH9Q86YJ5 346 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 CXorf38Q8TB03 319 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 RHBDD1Q8TEB9 315 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 PCIF1Q9H4Z3 704 aa23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 KIAA1522Q9P206 1035 aaPredicted RBP23.15■■□□□ 1.3
CAPNS1-205ENST00000588780 TRABD2BA6NFA1 517 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 CBFA2T3O75081 653 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 CER1O95813 267 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 PRB1P04280 392 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 WARSP23381 471 aaKnown RBP23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 CD6P30203 668 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 GNL1P36915 607 aaPredicted RBP23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 MATKP42679 507 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 HECTD3Q5T447 861 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 PDZD8Q8NEN9 1154 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 OR6B3Q8NGW1 331 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 CRELD1Q96HD1 420 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 XPO6Q96QU8 1125 aaKnown RBP23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 IL21RQ9HBE5 538 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 TM7SF3Q9NS93 570 aa23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 CHORDC1Q9UHD1 332 aaPredicted RBP23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 GOLGA4Q13439 2230 aaKnown RBP23.14■■□□□ 1.29
CAPNS1-205ENST00000588780 NEDD8-MDP1E9PL57 170 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 H3BQV1 296 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 ATXN1LP0C7T5 689 aaKnown RBP23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 L1TD1Q5T7N2 865 aaKnown RBP23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 NUP93Q8N1F7 819 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 GALNT15Q8N3T1 639 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 TOE1Q96GM8 510 aaKnown RBP23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 MRGPRX1Q96LB2 322 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 UBL7Q96S82 380 aaPredicted RBP23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 KIF2CQ99661 725 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 CDC6Q99741 560 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 GPR174Q9BXC1 333 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 ELOVL4Q9GZR5 314 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 CACNA2D2Q9NY47 1150 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 HCN2Q9UL51 889 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 STARD13Q9Y3M8 1113 aa23.13■■□□□ 1.29
CAPNS1-205ENST00000588780 CILPO75339 1184 aa23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 PRPF6O94906 941 aaKnown RBP23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 RTN3O95197 1032 aaPredicted RBP23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 NCAM1P13591 858 aa23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 GARTP22102 1010 aa23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 SMG1Q96Q15 3661 aaKnown RBP23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 CBWD1Q9BRT8 395 aa23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 BBS2Q9BXC9 721 aa23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 ZNF518BQ9C0D4 1074 aa23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 INTS13Q9NVM9 706 aa23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 DKK4Q9UBT3 224 aa23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 PTPRBP23467 1997 aa23.12■■□□□ 1.29
CAPNS1-205ENST00000588780 FAM149AA5PLN7 773 aa23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 EIF5BO60841 1220 aaKnown RBP23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 ABCG1P45844 678 aa23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 CACNA2D1P54289 1103 aa23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 STARD3Q14849 445 aa23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 IL27RAQ6UWB1 636 aa23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 TPGS1Q6ZTW0 290 aa23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 PIP4K2CQ8TBX8 421 aa23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 MRPL45Q9BRJ2 306 aaKnown RBP23.11■■□□□ 1.29
CAPNS1-205ENST00000588780 CCSER2Q9H7U1 834 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms