RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 KITP10721 976 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 VCLP18206 1134 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 CRHR1P34998 444 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 RFC1P35251 1148 aaPredicted RBP17.1■□□□□ 0.33
RANBP3-209ENST00000587411 ERFP50548 548 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 TMEM132AQ24JP5 1023 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 KCNT1Q5JUK3 1230 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 CYP4A22Q5TCH4 519 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 CES4AQ5XG92 561 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 SPATA24Q86W54 205 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 WDR75Q8IWA0 830 aaKnown RBP17.1■□□□□ 0.33
RANBP3-209ENST00000587411 KCTD6Q8NC69 237 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 SPATA18Q8TC71 538 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 BTBD9Q96Q07 612 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 TAAR1Q96RJ0 339 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 C6orf222P0C671 652 aaPredicted RBP17.1■□□□□ 0.33
RANBP3-209ENST00000587411 KRT3P12035 628 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 VAV1P15498 845 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 AP3M2P53677 418 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 UBAP2LQ14157 1087 aaKnown RBP17.1■□□□□ 0.33
RANBP3-209ENST00000587411 SFT2D3Q587I9 215 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 DARS2Q6PI48 645 aaKnown RBP17.1■□□□□ 0.33
RANBP3-209ENST00000587411 WDTC1Q8N5D0 677 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 ARFGAP1Q8N6T3 406 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 PYDC1Q8WXC3 89 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 FAF2Q96CS3 445 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 HIC2Q96JB3 615 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 ITGA11Q9UKX5 1188 aa17.1■□□□□ 0.33
RANBP3-209ENST00000587411 A0A0B4J269 797 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 PEX1O43933 1283 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 ASS1P00966 412 aaKnown RBP17.09■□□□□ 0.33
RANBP3-209ENST00000587411 PYGLP06737 847 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 YWHAZP63104 245 aaKnown RBP17.09■□□□□ 0.33
RANBP3-209ENST00000587411 MSLNQ13421 630 aaPredicted RBP17.09■□□□□ 0.33
RANBP3-209ENST00000587411 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 CMASQ8NFW8 434 aaPredicted RBP17.09■□□□□ 0.33
RANBP3-209ENST00000587411 OR5B17Q8NGF7 314 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 GDPD5Q8WTR4 605 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 PRMT6Q96LA8 375 aaPredicted RBP17.09■□□□□ 0.33
RANBP3-209ENST00000587411 SLC13A1Q9BZW2 595 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 RSAD1Q9HA92 442 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 ZC3H7BQ9UGR2 993 aaKnown RBP17.09■□□□□ 0.33
RANBP3-209ENST00000587411 CNTNAP2Q9UHC6 1331 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 RGS2P41220 211 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 CHN2P52757 468 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 COPAP53621 1224 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 BTKQ06187 659 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 MMEL1Q495T6 779 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 ANKRD20A4Q4UJ75 823 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 SH2D4BQ5SQS7 431 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 SLC26A7Q8TE54 656 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 PDCD2LQ9BRP1 358 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 MSTO1Q9BUK6 570 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 FAM96AQ9H5X1 160 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 DHX33Q9H6R0 707 aaKnown RBP17.09■□□□□ 0.33
RANBP3-209ENST00000587411 ZNF395Q9H8N7 513 aaPredicted RBP17.09■□□□□ 0.33
RANBP3-209ENST00000587411 XAB2Q9HCS7 855 aaKnown RBP17.09■□□□□ 0.33
RANBP3-209ENST00000587411 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 PAK5Q9P286 719 aa17.09■□□□□ 0.33
RANBP3-209ENST00000587411 MEI4A8MW99 385 aa17.08■□□□□ 0.33
RANBP3-209ENST00000587411 ETS2P15036 469 aa17.08■□□□□ 0.33
RANBP3-209ENST00000587411 R3HDM1Q15032 1099 aaKnown RBP17.08■□□□□ 0.33
RANBP3-209ENST00000587411 NOMO1Q15155 1222 aa17.08■□□□□ 0.33
RANBP3-209ENST00000587411 PGM2L1Q6PCE3 622 aa17.08■□□□□ 0.33
RANBP3-209ENST00000587411 NCAPG2Q86XI2 1143 aa17.08■□□□□ 0.33
RANBP3-209ENST00000587411 LRRC39Q96DD0 335 aa17.08■□□□□ 0.33
RANBP3-209ENST00000587411 POPDC2Q9HBU9 364 aa17.08■□□□□ 0.33
RANBP3-209ENST00000587411 TESPA1A2RU30 521 aaPredicted RBP17.08■□□□□ 0.32
RANBP3-209ENST00000587411 CYB561D2O14569 222 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 CASQ2O14958 399 aaPredicted RBP17.08■□□□□ 0.32
RANBP3-209ENST00000587411 CD48P09326 243 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 GRIA2P42262 883 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 SLC25A3Q00325 362 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 CCNIQ14094 377 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 PDK3Q15120 406 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 XRRA1Q6P2D8 792 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 CCDC33Q8N5R6 958 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 ACTRT2Q8TDY3 377 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 EBF4Q9BQW3 602 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 NIF3L1Q9GZT8 377 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 HAPLN2Q9GZV7 340 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 PTTG2Q9NZH5 202 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 SEPT9Q9UHD8 586 aaPredicted RBP17.08■□□□□ 0.32
RANBP3-209ENST00000587411 ADAMTS6Q9UKP5 1117 aa17.08■□□□□ 0.32
RANBP3-209ENST00000587411 CXorf49A8MYA2 514 aaPredicted RBP17.07■□□□□ 0.32
RANBP3-209ENST00000587411 PSAPP07602 524 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 OSBPP22059 807 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 SERPINB9P50453 376 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 AQP4P55087 323 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 YWHAEP62258 255 aaKnown RBP17.07■□□□□ 0.32
RANBP3-209ENST00000587411 RPS6P62753 249 aaKnown RBP17.07■□□□□ 0.32
RANBP3-209ENST00000587411 RABGAP1LQ5R372 815 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 STXBP5Q5T5C0 1151 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 NDUFAF2Q8N183 169 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 JOSD2Q8TAC2 188 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 DGCR14Q96DF8 476 aaKnown RBP17.07■□□□□ 0.32
RANBP3-209ENST00000587411 NLRP4Q96MN2 994 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 RMDN3Q96TC7 470 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
RANBP3-209ENST00000587411 PXMP2Q9NR77 195 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms