RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 MRPL47Q9HD33 250 aaKnown RBP14.34□□□□□ -0.11
ITGB4-209ENST00000583327 GREB1Q4ZG55 1949 aa14.34□□□□□ -0.11
ITGB4-209ENST00000583327 CDH23Q9H251 3354 aa14.33□□□□□ -0.11
ITGB4-209ENST00000583327 C2CD4BA6NLJ0 364 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 ATMINO43313 823 aaPredicted RBP14.33□□□□□ -0.12
ITGB4-209ENST00000583327 RFPL2O75678 378 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 F11P03951 625 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 KRT3P12035 628 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 RFC1P35251 1148 aaPredicted RBP14.33□□□□□ -0.12
ITGB4-209ENST00000583327 RPL7AP62424 266 aaKnown RBP14.33□□□□□ -0.12
ITGB4-209ENST00000583327 YWHAZP63104 245 aaKnown RBP14.33□□□□□ -0.12
ITGB4-209ENST00000583327 TAF10Q12962 218 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 EIF4EBP2Q13542 120 aaPredicted RBP14.33□□□□□ -0.12
ITGB4-209ENST00000583327 VEPH1Q14D04 833 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 HFE2Q6ZVN8 426 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 BNIPLQ7Z465 357 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 PHLDB2Q86SQ0 1253 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 KIAA1328Q86T90 577 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 TMEM150AQ86TG1 271 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 ITIH5Q86UX2 942 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 RNF10Q8N5U6 811 aaKnown RBP14.33□□□□□ -0.12
ITGB4-209ENST00000583327 JOSD2Q8TAC2 188 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 FNIP1Q8TF40 1166 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 DDX23Q9BUQ8 820 aaKnown RBP14.33□□□□□ -0.12
ITGB4-209ENST00000583327 SYNCQ9H7C4 482 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 NMUR1Q9HB89 426 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 DZANK1Q9NVP4 752 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 CLIC5Q9NZA1 410 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 TRIM10Q9UDY6 481 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 CHORDC1Q9UHD1 332 aaPredicted RBP14.33□□□□□ -0.12
ITGB4-209ENST00000583327 SCINQ9Y6U3 715 aa14.33□□□□□ -0.12
ITGB4-209ENST00000583327 USP27XA6NNY8 438 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 NCK2O43639 380 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 HSF2BPO75031 334 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 ENDOD1O94919 500 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 GJB6O95452 261 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 LRG1P02750 347 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 PPP3CCP48454 512 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 PSEN1P49768 467 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 OGDHQ02218 1023 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 BSPRYQ5W0U4 402 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 DNAJC24Q6P3W2 148 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 ELMSAN1Q6PJG2 1045 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 PDZD8Q8NEN9 1154 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 ZNF512Q96ME7 567 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-209ENST00000583327 SELENOOQ9BVL4 669 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 NUP85Q9BW27 656 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 TSGA10Q9BZW7 698 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 POPDC2Q9HBU9 364 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 ZNF334Q9HCZ1 680 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-209ENST00000583327 OSGEPQ9NPF4 335 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 OSER1Q9NX31 292 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 CLEC1BQ9P126 229 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 DNMT3BQ9UBC3 853 aaKnown RBP14.32□□□□□ -0.12
ITGB4-209ENST00000583327 MYO1AQ9UBC5 1043 aa14.32□□□□□ -0.12
ITGB4-209ENST00000583327 UXTQ9UBK9 157 aaPredicted RBP14.32□□□□□ -0.12
ITGB4-209ENST00000583327 CCDC195A0A1B0GUA6 201 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 ZNF840PA6NDX5 716 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 GOLGA8SH3BPF8 625 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 DPYSL4O14531 572 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 CCL16O15467 120 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 LINC01565O15544 149 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 CCP110O43303 1012 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 KRT86O43790 486 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 TADA3O75528 432 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 LTFP02788 710 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 HOXB8P17481 243 aaPredicted RBP14.31□□□□□ -0.12
ITGB4-209ENST00000583327 PTPN2P17706 415 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 NOS2P35228 1153 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 FLT3P36888 993 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 LTBRP36941 435 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 MATKP42679 507 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 YWHAGP61981 247 aaKnown RBP eCLIP14.31□□□□□ -0.12
ITGB4-209ENST00000583327 ZNF252P-AS1Q0IIN9 211 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 FAM102AQ5T9C2 384 aaPredicted RBP14.31□□□□□ -0.12
ITGB4-209ENST00000583327 ANKRD54Q6NXT1 300 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 SYCE2Q6PIF2 218 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 SLFN11Q7Z7L1 901 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 HS6ST3Q8IZP7 471 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 ARHGAP18Q8N392 663 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 CENPIQ92674 756 aaPredicted RBP14.31□□□□□ -0.12
ITGB4-209ENST00000583327 FBXO32Q969P5 355 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 SLITRK1Q96PX8 696 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 NPY6RQ99463 290 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 TRIM7Q9C029 511 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 SFXN1Q9H9B4 322 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 METTL5Q9NRN9 209 aaKnown RBP14.31□□□□□ -0.12
ITGB4-209ENST00000583327 ABCC13Q9NSE7 274 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 TRMT1Q9NXH9 659 aaKnown RBP14.31□□□□□ -0.12
ITGB4-209ENST00000583327 GMIPQ9P107 970 aa14.31□□□□□ -0.12
ITGB4-209ENST00000583327 REV3LO60673 3130 aa14.3□□□□□ -0.12
ITGB4-209ENST00000583327 A0A1W2PQH9 124 aa14.3□□□□□ -0.12
ITGB4-209ENST00000583327 GOLGA6L9A6NEM1 432 aa14.3□□□□□ -0.12
ITGB4-209ENST00000583327 MOSPD3O75425 235 aa14.3□□□□□ -0.12
ITGB4-209ENST00000583327 DAB1O75553 588 aa14.3□□□□□ -0.12
ITGB4-209ENST00000583327 IGLV3-25P01717 112 aa14.3□□□□□ -0.12
ITGB4-209ENST00000583327 PTPN9P43378 593 aa14.3□□□□□ -0.12
ITGB4-209ENST00000583327 ZNF143P52747 638 aaPredicted RBP14.3□□□□□ -0.12
ITGB4-209ENST00000583327 ACAP1Q15027 740 aa14.3□□□□□ -0.12
ITGB4-209ENST00000583327 CCDC14Q49A88 953 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms