RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 EIF3CQ99613 913 aaKnown RBP10.94□□□□□ -0.66
CCDC47-203ENST00000580986 S1PR5Q9H228 398 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 IGFLR1Q9H665 355 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 LUC7LQ9NQ29 371 aaKnown RBP10.94□□□□□ -0.66
CCDC47-203ENST00000580986 ASAH2Q9NR71 780 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 TMEM51Q9NW97 253 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 CLDND1Q9NY35 253 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 CLIC5Q9NZA1 410 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 C2orf16Q68DN1 1984 aa10.94□□□□□ -0.66
CCDC47-203ENST00000580986 ANKRD62A6NC57 917 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 PAPSS1O43252 624 aaPredicted RBP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 AKR1B10O60218 316 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 DDX6P26196 483 aaKnown RBP eCLIP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 MTHFRP42898 656 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 GPR15P49685 360 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 DAOAP59103 153 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 MRPS5P82675 430 aaKnown RBP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 GOLGA8FQ08AF8 430 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 GOLGA8DPQ0D2H9 430 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 ADIGQ0VDE8 80 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 TAF12Q16514 161 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 EFHC1Q5JVL4 640 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 CES5AQ6NT32 575 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 KLHDC10Q6PID8 442 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 OLFML1Q6UWY5 402 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 SLC26A9Q7LBE3 791 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 BHLHA9Q7RTU4 235 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 GPRIN1Q7Z2K8 1008 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 MCOLN2Q8IZK6 566 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 C3orf20Q8ND61 904 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 CPA5Q8WXQ8 436 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 SUSD6Q92537 303 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 SMG7Q92540 1137 aaKnown RBP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 MCRS1Q96EZ8 462 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 RIPOR3Q96MK2 946 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 CDK5RAP1Q96SZ6 601 aaKnown RBP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 UBE2ZQ9H832 354 aaPredicted RBP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 IL21Q9HBE4 155 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 WDR6Q9NNW5 1121 aaKnown RBP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 TLR8Q9NR97 1041 aaKnown RBP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 ST7Q9NRC1 585 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 ADAM22Q9P0K1 906 aa10.93□□□□□ -0.66
CCDC47-203ENST00000580986 EPN1Q9Y6I3 576 aaPredicted RBP10.93□□□□□ -0.66
CCDC47-203ENST00000580986 TCRBV5S1A1TA0A578 114 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 CCL16O15467 120 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 TADA3O75528 432 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 NDUFA10O95299 355 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 IPO7O95373 1038 aaKnown RBP10.92□□□□□ -0.66
CCDC47-203ENST00000580986 FTLP02792 175 aaPredicted RBP10.92□□□□□ -0.66
CCDC47-203ENST00000580986 F11P03951 625 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 ERBB2P04626 1255 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 RHOP08100 348 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 WEE1P30291 646 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 USP46P62068 366 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 DLX2Q07687 328 aaPredicted RBP10.92□□□□□ -0.66
CCDC47-203ENST00000580986 SMAD4Q13485 552 aaKnown RBP10.92□□□□□ -0.66
CCDC47-203ENST00000580986 TCEAL1Q15170 157 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 PUS10Q3MIT2 529 aaKnown RBP10.92□□□□□ -0.66
CCDC47-203ENST00000580986 PRSS36Q5K4E3 855 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 CYP4A22Q5TCH4 519 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 XYLT1Q86Y38 959 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 TXLNBQ8N3L3 684 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 SCAMP5Q8TAC9 235 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 GIPC2Q8TF65 315 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 HLA-CQ95604 372 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 FBXO32Q969P5 355 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 GCNAQ96QF7 691 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCDC47-203ENST00000580986 ULBP1Q9BZM6 244 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 SYNCQ9H7C4 482 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 SEPT11Q9NVA2 429 aaKnown RBP10.92□□□□□ -0.66
CCDC47-203ENST00000580986 TRPM5Q9NZQ8 1165 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 DNMT3BQ9UBC3 853 aaKnown RBP10.92□□□□□ -0.66
CCDC47-203ENST00000580986 CD207Q9UJ71 328 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 ZFP37Q9Y6Q3 630 aaPredicted RBP10.92□□□□□ -0.66
CCDC47-203ENST00000580986 NOTCH4Q99466 2003 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 ANAPC1Q9H1A4 1944 aa10.92□□□□□ -0.66
CCDC47-203ENST00000580986 ZNF840PA6NDX5 716 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 SOWAHDA6NJG2 315 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 HSF2BPO75031 334 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 OLFM2O95897 454 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 TMEM253P0C7T8 217 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
CCDC47-203ENST00000580986 RGS7P49802 495 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 KRT83P78385 493 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 CCZ1BP86790 482 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 CCZ1P86791 482 aaPredicted RBP10.91□□□□□ -0.66
CCDC47-203ENST00000580986 SLC6A3Q01959 620 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 GFPT1Q06210 699 aaPredicted RBP10.91□□□□□ -0.66
CCDC47-203ENST00000580986 TAF10Q12962 218 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 MTMR3Q13615 1198 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 SPA17Q15506 151 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 ATAT1Q5SQI0 421 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 CCDC122Q5T0U0 273 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 RARS2Q5T160 578 aaKnown RBP10.91□□□□□ -0.66
CCDC47-203ENST00000580986 SDHAF4Q5VUM1 108 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 PLEKHA7Q6IQ23 1121 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 TMC5Q6UXY8 1006 aa10.91□□□□□ -0.66
CCDC47-203ENST00000580986 MMS22LQ6ZRQ5 1243 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms