RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 OTUB2Q96DC9 234 aa16.78■□□□□ 0.28
CRLF3-203ENST00000578692 HHIPQ96QV1 700 aa16.78■□□□□ 0.28
CRLF3-203ENST00000578692 PNKPQ96T60 521 aa16.78■□□□□ 0.28
CRLF3-203ENST00000578692 NACA2Q9H009 215 aa16.78■□□□□ 0.28
CRLF3-203ENST00000578692 SEMA4GQ9NTN9 838 aa16.78■□□□□ 0.28
CRLF3-203ENST00000578692 RAB20Q9NX57 234 aa16.78■□□□□ 0.28
CRLF3-203ENST00000578692 HHLA1C9JL84 531 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 TLR5O60602 858 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 SMC2O95347 1197 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 ADH1CP00326 375 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 ACO1P21399 889 aaKnown RBP16.77■□□□□ 0.28
CRLF3-203ENST00000578692 EIF2DP41214 584 aaKnown RBP16.77■□□□□ 0.28
CRLF3-203ENST00000578692 SEC13P55735 322 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 ZNF394Q53GI3 561 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 COBLL1Q53SF7 1204 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 JAKMIP2Q96AA8 810 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 FAXDC2Q96IV6 333 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 TSG101Q99816 390 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 EBF1Q9UH73 591 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 SCML2Q9UQR0 700 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 PCDHA5Q9Y5H7 936 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.77■□□□□ 0.28
CRLF3-203ENST00000578692 MYO16Q9Y6X6 1858 aa16.77■□□□□ 0.28
CRLF3-203ENST00000578692 WDR87Q6ZQQ6 2873 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 A0A0A0MRY4 1105 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 ANTXRLA6NF34 631 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 APBB3O95704 486 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 TBX18O95935 607 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 ADH5P11766 374 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 ATP5C1P36542 298 aaKnown RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 MXI1P50539 228 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 ATXN1P54253 815 aaKnown RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 MRPS21P82921 87 aaKnown RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 FKBP3Q00688 224 aaKnown RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 GAD2Q05329 585 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 CSRP2Q16527 193 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 LY6G5CQ5SRR4 150 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 PPP1R26Q5T8A7 1209 aaPredicted RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 ANKRD40Q6AI12 368 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 GPRIN1Q7Z2K8 1008 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 TTC39CQ8N584 583 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 SPATA20Q8TB22 786 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 ERCC4Q92889 916 aaPredicted RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 SMARCE1Q969G3 411 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 LOXL4Q96JB6 756 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 HEXIM2Q96MH2 286 aaKnown RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 TIGD1Q96MW7 591 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 DUSP9Q99956 384 aaKnown RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 PNPLA8Q9NP80 782 aa16.77■□□□□ 0.27
CRLF3-203ENST00000578692 HOOK1Q9UJC3 728 aaKnown RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 CDV3Q9UKY7 258 aaKnown RBP16.77■□□□□ 0.27
CRLF3-203ENST00000578692 MYOFQ9NZM1 2061 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 RALGAPA1Q6GYQ0 2036 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 KIAA1549LQ6ZVL6 1849 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 DMXL1Q9Y485 3027 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 KAT7O95251 611 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 APODP05090 189 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 IRF1P10914 325 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 TCERG1LQ5VWI1 586 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 PRR23CQ6ZRP0 262 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 KBTBD6Q86V97 674 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 C12orf40Q86WS4 652 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 BBS7Q8IWZ6 715 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 TATDN2Q93075 761 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 WBP2Q969T9 261 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 ZC3H10Q96K80 434 aaKnown RBP16.76■□□□□ 0.27
CRLF3-203ENST00000578692 KLF16Q9BXK1 252 aaPredicted RBP16.76■□□□□ 0.27
CRLF3-203ENST00000578692 DUSP16Q9BY84 665 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 GTPBP4Q9BZE4 634 aaKnown RBP16.76■□□□□ 0.27
CRLF3-203ENST00000578692 CYLDQ9NQC7 956 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 CISHQ9NSE2 258 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 OSER1Q9NX31 292 aa16.76■□□□□ 0.27
CRLF3-203ENST00000578692 EML5Q05BV3 1969 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 CYP26A1O43174 497 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 DGKEP52429 567 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 KIF11P52732 1056 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 PMS1P54277 932 aaKnown RBP16.75■□□□□ 0.27
CRLF3-203ENST00000578692 MESP2Q0VG99 397 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 BTBD8Q5XKL5 378 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 HTR3DQ70Z44 454 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 ZC3H3Q8IXZ2 948 aaKnown RBP16.75■□□□□ 0.27
CRLF3-203ENST00000578692 CCDC33Q8N5R6 958 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 NAT16Q8N8M0 369 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 TSTD1Q8NFU3 115 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 TMEM176AQ96HP8 235 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 RTKNQ9BST9 563 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 ARRDC1-AS1Q9H2J1 176 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 NMUR1Q9HB89 426 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 ARHGEF4Q9NR80 690 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 SPHK2Q9NRA0 654 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 MMP17Q9ULZ9 603 aa16.75■□□□□ 0.27
CRLF3-203ENST00000578692 A0A1W2PQH9 124 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.74■□□□□ 0.27
CRLF3-203ENST00000578692 SLC16A3O15427 465 aaKnown RBP16.74■□□□□ 0.27
CRLF3-203ENST00000578692 FOXD2O60548 495 aaPredicted RBP16.74■□□□□ 0.27
CRLF3-203ENST00000578692 RARGP13631 454 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 TIE1P35590 1138 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 GRIA2P42262 883 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 TNFRSF4P43489 277 aa16.74■□□□□ 0.27
CRLF3-203ENST00000578692 LRRC63Q05C16 580 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms