RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MEIOBQ8N635 442 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 LZTR1Q8N653 840 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 ZBTB8BQ8NAP8 495 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 OR14C36Q8NHC7 312 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 ZCCHC10Q8TBK6 192 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 PRPF31Q8WWY3 499 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 NCSTNQ92542 709 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 LRRC59Q96AG4 307 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 C3orf49Q96BT1 292 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 EPSTI1Q96J88 318 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 CHAMP1Q96JM3 812 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 CLPTM1LQ96KA5 538 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 GCNAQ96QF7 691 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 SH3GL2Q99962 352 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 DBNDD2Q9BQY9 259 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 PLVAPQ9BX97 442 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 GCOM2Q9BZD3 368 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 KLHL4Q9C0H6 718 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 PRDM12Q9H4Q4 367 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 VCPKMTQ9H867 229 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 CYP4F12Q9HCS2 524 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 SEMA3GQ9NS98 782 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 TBC1D23Q9NUY8 699 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 PPP1R14DQ9NXH3 145 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 NXF1Q9UBU9 619 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 RGS17Q9UGC6 210 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 ZC3H7BQ9UGR2 993 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 APPL1Q9UKG1 709 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 PCDHA6Q9UN73 950 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 CHKBQ9Y259 395 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 ATP11BQ9Y2G3 1177 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 TBC1D30Q9Y2I9 924 aa5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 CHTOPQ9Y3Y2 248 aaKnown RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 COL17A1Q9UMD9 1497 aaPredicted RBP5.31□□□□□ -1.56
TOPBP1-210ENST00000572787 KDM3AQ9Y4C1 1321 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 ZSCAN5CA6NGD5 496 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 NPIPB15A6NHN6 443 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 GLOD5A6NK44 160 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 LIPT2A6NK58 231 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 H0YCG3 227 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 MAN2B1O00754 1011 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 KLK10O43240 276 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 DNPH1O43598 174 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 NMT2O60551 498 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 TLR2O60603 784 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 TFRCP02786 760 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 TPM3P06753 285 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 SPARCP09486 303 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 TPM1P09493 284 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 FTH1P19P0C7X4 201 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 ACTN1P12814 892 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 PRG2P13727 222 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 GNAT2P19087 354 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 EPHA1P21709 976 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 HOXA10P31260 410 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 RFC4P35249 363 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 GGT5P36269 586 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 BMPR1AP36894 532 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 FLT3LGP49771 235 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 GALK1P51570 392 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 ATXN3P54252 364 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 ALDH18A1P54886 795 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 TNP2Q05952 138 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 NSUN2Q08J23 767 aaKnown RBP eCLIP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 TBC1D8BQ0IIM8 1120 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 NPRL3Q12980 569 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 TRIM28Q13263 835 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 PTK6Q13882 451 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 TRIM25Q14258 630 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 STK11Q15831 433 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 NFIL3Q16649 462 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 KRT71Q3SY84 523 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 KHDC1Q4VXA5 237 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 NHSL2Q5HYW2 709 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 ATXN7L2Q5T6C5 722 aaPredicted RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 CES4AQ5XG92 561 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 CPZQ66K79 652 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 PM20D1Q6GTS8 502 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 ETFRF1Q6IPR1 90 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 PSAPL1Q6NUJ1 521 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC25A24Q6NUK1 477 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 MICU3Q86XE3 530 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 LYSMD2Q8IV50 215 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 RNF214Q8ND24 703 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 SUPT20HQ8NEM7 779 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 PSMA8Q8TAA3 256 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 SNIP1Q8TAD8 396 aaKnown RBP5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 RNF141Q8WVD5 230 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 KCNE4Q8WWG9 221 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 WNT8BQ93098 351 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 MR1Q95460 341 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC22A18Q96BI1 424 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 NRBF2Q96F24 287 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC30A3Q99726 388 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 TUBB6Q9BUF5 446 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 ZNF518BQ9C0D4 1074 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 ISCUQ9H1K1 167 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 SLC25A18Q9H1K4 315 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 CDIP1Q9H305 208 aa5.3□□□□□ -1.56
TOPBP1-210ENST00000572787 POFUT1Q9H488 388 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms