RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 NRG4Q8WWG1 115 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 PRPF31Q8WWY3 499 aaKnown RBP11.18□□□□□ -0.62
CCDC40-207ENST00000572253 NR1H4Q96RI1 486 aaPredicted RBP11.18□□□□□ -0.62
CCDC40-207ENST00000572253 THTPAQ9BU02 230 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 C2orf40Q9H1Z8 148 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 PGAP2Q9UHJ9 254 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 C2CD2Q9Y426 696 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 MAD1L1Q9Y6D9 718 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 M0QYV0 167 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 PLSCR1O15162 318 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 SRGAP2CP0DJJ0 459 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 AQP5P55064 265 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 STX3Q13277 289 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 WDR75Q8IWA0 830 aaKnown RBP11.18□□□□□ -0.62
CCDC40-207ENST00000572253 TTLL6Q8N841 843 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 SLC4A11Q8NBS3 891 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 LRRC39Q96DD0 335 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 CPXM1Q96SM3 734 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 CNPY3Q9BT09 278 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 TM7SF2O76062 418 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 KITP10721 976 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 P4HA1P13674 534 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 GPD1P21695 349 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 TUBP50607 506 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 ALDH18A1P54886 795 aaKnown RBP11.18□□□□□ -0.62
CCDC40-207ENST00000572253 BACE1P56817 501 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 BCAR1P56945 870 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 YWHAZP63104 245 aaKnown RBP11.18□□□□□ -0.62
CCDC40-207ENST00000572253 DSG1Q02413 1049 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 IER5Q5VY09 327 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 NPNTQ6UXI9 565 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 C4orf22Q6V702 233 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 FAM167AQ96KS9 214 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 FAM192AQ9GZU8 254 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 VCX3BQ9H321 246 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 TTLL3Q9Y4R7 772 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 ASB3Q9Y575 518 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 ARID2Q68CP9 1835 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 APOL1O14791 398 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 ERBB2P04626 1255 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 STAT5BP51692 787 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 POLE2P56282 527 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 MDH1BQ5I0G3 518 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 DCAF15Q66K64 600 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 NDUFAF2Q8N183 169 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 ARHGAP18Q8N392 663 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 RBM15BQ8NDT2 890 aaKnown RBP11.18□□□□□ -0.62
CCDC40-207ENST00000572253 WNK4Q96J92 1243 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 ACO2Q99798 780 aaKnown RBP11.18□□□□□ -0.62
CCDC40-207ENST00000572253 MYOZ2Q9NPC6 264 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 PCMTD2Q9NV79 361 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 TJP2Q9UDY2 1190 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 SCAF8Q9UPN6 1271 aaKnown RBP11.18□□□□□ -0.62
CCDC40-207ENST00000572253 SORCS3Q9UPU3 1222 aa11.18□□□□□ -0.62
CCDC40-207ENST00000572253 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.18□□□□□ -0.62
CCDC40-207ENST00000572253 EME2A4GXA9 379 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-207ENST00000572253 BIRC5O15392 142 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 FKBP6O75344 327 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 ATG7O95352 703 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 APOEP02649 317 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 APRTP07741 180 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 ANPEPP15144 967 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 RAP1GAPP47736 663 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 ZNF143P52747 638 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-207ENST00000572253 PTPN11Q06124 597 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-207ENST00000572253 MXD4Q14582 209 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-207ENST00000572253 PDK2Q15119 407 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 CWF19L1Q69YN2 538 aaKnown RBP11.17□□□□□ -0.62
CCDC40-207ENST00000572253 OR6B2Q6IFH4 312 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 RIPOR1Q6ZS17 1223 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 DPH6Q7L8W6 267 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 EXOC8Q8IYI6 725 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 ULK2Q8IYT8 1036 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 TTC1Q99614 292 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 GPAMQ9HCL2 828 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 MKS1Q9NXB0 559 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 DNAJB4Q9UDY4 337 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 MARCOQ9UEW3 520 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-207ENST00000572253 CPSF3Q9UKF6 684 aaKnown RBP11.17□□□□□ -0.62
CCDC40-207ENST00000572253 ARHGAP42A6NI28 874 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 AVILO75366 819 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 EDN1P05305 212 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 AMPD1P23109 780 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 ICAM3P32942 547 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 OSTNP61366 133 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 TAF5Q15542 800 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 C11orf91Q3C1V1 193 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 SCYL2Q6P3W7 929 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 SH2D5Q6ZV89 423 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 KIAA0319LQ8IZA0 1049 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 GALNT15Q8N3T1 639 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 RNF149Q8NC42 400 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 SIKE1Q9BRV8 207 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 MECRQ9BV79 373 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 RPF1Q9H9Y2 349 aaKnown RBP11.17□□□□□ -0.62
CCDC40-207ENST00000572253 PPME1Q9Y570 386 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 HEY1Q9Y5J3 304 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 WASF2Q9Y6W5 498 aa11.17□□□□□ -0.62
CCDC40-207ENST00000572253 MAFO75444 373 aaPredicted RBP11.17□□□□□ -0.62
CCDC40-207ENST00000572253 FAM155BO75949 473 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms