RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MALT1Q9UDY8 824 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 SEC63Q9UGP8 760 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 FBXO40Q9UH90 709 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 IL19Q9UHD0 177 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 MAN1B1Q9UKM7 699 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 KCNH3Q9ULD8 1083 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 PPM1HQ9ULR3 514 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 INVSQ9Y283 1065 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TLR6Q9Y2C9 796 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 WDR37Q9Y2I8 494 aa3.74□□□□□ -1.81
SMG6-208ENST00000570874 TNPO3Q9Y5L0 923 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 SRPRBQ9Y5M8 271 aaKnown RBP3.74□□□□□ -1.81
SMG6-208ENST00000570874 CITO14578 2027 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ZNF638Q14966 1978 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 UQCRHLA0A096LP55 91 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 A0A1W2PQH9 124 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 hCG_1807616A0A1W2PRN6 198 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 A0A1W2PRU2 124 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ESYT2A0FGR8 921 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 RHPN2P1A8MT19 583 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 UPK3BL1B0FP48 263 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 RSPH10B2B2RC85 870 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 GPR89AB7ZAQ6 455 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 NT5C1B-RDH14C9J2C7 533 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ADM5C9JUS6 153 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 UPK3BL2E5RIL1 263 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 H0YIV9 168 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 PSMD9O00233 223 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ABLIM1O14639 778 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 MEIS2O14770 477 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FSCN2O14926 492 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 MAPK13O15264 365 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ZSCAN9O15535 394 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 FFAR2O15552 330 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 TTI1O43156 1089 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 NCK2O43639 380 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 SYNCRIPO60506 623 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 CCNT1O60563 726 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 PEX10O60683 326 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 KCNJ13O60928 360 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 PIAS2O75928 621 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 TMEM63AO94886 807 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ASGR1P07306 291 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 UQCRHP07919 91 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 OR52Z1P0C646 297 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 RSPH10BP0C881 870 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 POLR2MP0CAP2 368 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 GPR89BP0CG08 455 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 NR2F1P10589 423 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 EPB41P11171 864 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 FGFR1P11362 822 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 BMP3P12645 472 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ALOX15P16050 662 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 RPS12P25398 132 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 DNAJB1P25685 340 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 CTNNA2P26232 953 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 EEF1GP26641 437 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 CALML3P27482 149 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ADSSP30520 456 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 RFC1P35251 1148 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 MAP2K2P36507 400 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 RGS2P41220 211 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 PIK3CBP42338 1070 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 SMCPP49901 116 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 NT5C2P49902 561 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 CASP5P51878 434 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 VCPP55072 806 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 ARPC4P59998 168 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 IL2P60568 153 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 SUMO1P63165 101 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 MRPS15P82914 257 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 HTRA3P83110 453 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 KRT17Q04695 432 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 SPAG1Q07617 926 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ACTN3Q08043 901 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 MAPK7Q13164 816 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ZNF460Q14592 562 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 NOLC1Q14978 699 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMG6-208ENST00000570874 NONOQ15233 471 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMG6-208ENST00000570874 ZRSR1Q15695 479 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 ADIPOQQ15848 244 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 STX1AQ16623 288 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FAM110CQ1W6H9 321 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 TMEM266Q2M3C6 531 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 BBS9Q3SYG4 887 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 CCDC14Q49A88 953 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 HSF5Q4G112 596 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 HSP90AA4PQ58FG1 418 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FAM209BQ5JX69 171 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FBXO47Q5MNV8 452 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ATAT1Q5SQI0 421 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 EMC10Q5UCC4 262 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FKBP1CQ5VVH2 108 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 KANK2Q63ZY3 851 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 WDR93Q6P2C0 686 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FDX2Q6P4F2 183 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 LIAT1Q6ZQX7 453 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 NUDT18Q6ZVK8 323 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 MOB2Q70IA6 237 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 UBE2R2Q712K3 238 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms