RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 CYP4F2P78329 520 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 MTAPQ13126 283 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 ERCC6LQ2NKX8 1250 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 RNASE12Q5GAN4 147 aaKnown RBP4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 FBXO42Q6P3S6 717 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 AMIGO2Q86SJ2 522 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 CCDC28AQ8IWP9 274 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 TXLNBQ8N3L3 684 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 C11orf44Q8N8P7 122 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 FANCBQ8NB91 859 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 ZNF668Q96K58 619 aaPredicted RBP4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 TNIP3Q96KP6 325 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 HIST1H2AAQ96QV6 131 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 SLC25A32Q9H2D1 315 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 RIOX1Q9H6W3 641 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 CPNE5Q9HCH3 593 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 ZBTB26Q9HCK0 441 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 RGL1Q9NZL6 768 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 ZMYND8Q9ULU4 1186 aaPredicted RBP4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 ADAMTS5Q9UNA0 930 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 SLC27A6Q9Y2P4 619 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 AOX1Q06278 1338 aa4.63□□□□□ -1.67
HERPUD1-212ENST00000567944 OR2W5A6NFC9 320 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 DHHO43323 396 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 HNRNPCP07910 306 aaKnown RBP eCLIP4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 NHLRC4P0CG21 123 aaPredicted RBP4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 NDUFB7P17568 137 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 EGR1P18146 543 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 PPM1AP35813 382 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 TPTEP56180 551 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 INHBEP58166 350 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 PROK1P58294 105 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 TFF2Q03403 129 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 DEUP1Q05D60 604 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 HDAC1Q13547 482 aaPredicted RBP4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 TMTC4Q5T4D3 741 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 ABLIM2Q6H8Q1 611 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 MZT2AQ6P582 158 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 CLEC9AQ6UXN8 241 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 ARHGEF25Q86VW2 580 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 SPICE1Q8N0Z3 855 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 BOLLQ8N9W6 283 aaKnown RBP4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 MBD3L2Q8NHZ7 208 aaPredicted RBP4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 SUN3Q8TAQ9 357 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 SMCR8Q8TEV9 937 aaPredicted RBP4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 TBC1D5Q92609 795 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 ZNF566Q969W8 418 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 SNX27Q96L92 541 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 WDR24Q96S15 920 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 PCDHAC1Q9H158 963 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 TRIM36Q9NQ86 728 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 C11orf21Q9P2W6 132 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 CDC23Q9UJX2 597 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 ASAP1Q9ULH1 1129 aa4.62□□□□□ -1.67
HERPUD1-212ENST00000567944 ABHD14A-ACY1A0A1B0GW23 586 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 ORC4O43929 436 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 FGAP02671 866 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 PRKCBP05771 671 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 PECAM1P16284 738 aaPredicted RBP4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 SLC5A2P31639 672 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 SOX10P56693 466 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 ACOX1Q15067 660 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 SMN1Q16637 294 aaKnown RBP4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 SLC5A9Q2M3M2 681 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 PCID2Q5JVF3 399 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 GRHL2Q6ISB3 625 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 MRNIPQ6NTE8 343 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 USP17L6PQ6QN14 398 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 ADGRG3Q86Y34 549 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 SAMD3Q8N6K7 520 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 ABHD11Q8NFV4 315 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 TTLL2Q9BWV7 592 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 STK33Q9BYT3 514 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 WDR12Q9GZL7 423 aaKnown RBP4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 IGSF9Q9P2J2 1179 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 TAGLN3Q9UI15 199 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 COX11Q9Y6N1 276 aa4.61□□□□□ -1.67
HERPUD1-212ENST00000567944 WIPF3A6NGB9 483 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 TARM1B6A8C7 271 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 M0R3H8 397 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 QSOX1O00391 747 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 PROP1O75360 226 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 NPSP0C0P6 89 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 RBL1P28749 1068 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 DIO1P49895 249 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 NHLH1Q02575 133 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 CLCA4Q14CN2 919 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 RAB30Q15771 203 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 MAPKAPK3Q16644 382 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 ARHGAP15Q53QZ3 475 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 AKNAD1Q5T1N1 836 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 L1TD1Q5T7N2 865 aaKnown RBP4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 FAXCQ5TGI0 409 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 MTHFD1LQ6UB35 978 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 NAPRTQ6XQN6 538 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 RAB11FIP4Q86YS3 637 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 SIRT6Q8N6T7 355 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 ZG16BQ96DA0 208 aa4.6□□□□□ -1.67
HERPUD1-212ENST00000567944 PRR11Q96HE9 360 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms