RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 PSMA7O14818 248 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 COCHO43405 550 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 RNF40O75150 1001 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 CILPO75339 1184 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 BEST1O76090 585 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 EGFP01133 1207 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 ZDHHC11BP0C7U3 371 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 MBL2P11226 248 aaPredicted RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 CD58P19256 250 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 CNR2P34972 360 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 GALK1P51570 392 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 MAP3K7CLP57077 242 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 ORC1Q13415 861 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 DCAF17Q5H9S7 520 aaPredicted RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 TCERG1LQ5VWI1 586 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 ANKRD40Q6AI12 368 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 FOXR2Q6PJQ5 311 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 THSD4Q6ZMP0 1018 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 CLEC20AQ6ZU45 233 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 FILIP1Q7Z7B0 1213 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 LONP2Q86WA8 852 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 GPR161Q8N6U8 529 aaKnown RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 ZMIZ2Q8NF64 920 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 CCDC26Q8TAB7 109 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 SCAMP5Q8TAC9 235 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 WHAMMQ8TF30 809 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 PTCD2Q8WV60 388 aaKnown RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 SEMA4DQ92854 862 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 ERCC4Q92889 916 aaPredicted RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 CD101Q93033 1021 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 OTUB2Q96DC9 234 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 CYFIP2Q96F07 1278 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 DHTKD1Q96HY7 919 aaPredicted RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 TWNKQ96RR1 684 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 KCNK17Q96T54 332 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 SMOQ99835 787 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 DUSP9Q99956 384 aaKnown RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 P2RY13Q9BPV8 354 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 LINC00597Q9H2U6 94 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 METTL14Q9HCE5 456 aaKnown RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.06□□□□□ -1.61e-7■■■■■ 115.4
CLK3-219ENST00000567805 TLR8Q9NR97 1041 aaKnown RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 FAM49BQ9NUQ9 324 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 RAB20Q9NX57 234 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 SMPD4Q9NXE4 827 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 TBC1D14Q9P2M4 693 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 NCDNQ9UBB6 729 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 CHORDC1Q9UHD1 332 aaPredicted RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 RAB23Q9ULC3 237 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 SMG5Q9UPR3 1016 aaKnown RBP5.06□□□□□ -1.6
CLK3-219ENST00000567805 SCML2Q9UQR0 700 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 COQ4Q9Y3A0 265 aa5.06□□□□□ -1.6
CLK3-219ENST00000567805 CEP192Q8TEP8 1941 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 BICDL2A1A5D9 508 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 TRIM49BA6NDI0 452 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 HHLA1C9JL84 531 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 LCE2BO14633 110 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 PMM2O15305 246 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 CYP26A1O43174 497 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 TLR5O60602 858 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 LRP3O75074 770 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 ADH1CP00326 375 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 CYP17A1P05093 508 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 TBXAS1P24557 533 aaPredicted RBP5.05□□□□□ -1.6
CLK3-219ENST00000567805 ADORA2BP29275 332 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 OPRD1P41143 372 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 EIF2DP41214 584 aaKnown RBP5.05□□□□□ -1.6
CLK3-219ENST00000567805 FNTBP49356 437 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 KIF11P52732 1056 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 PMS1P54277 932 aaKnown RBP5.05□□□□□ -1.6
CLK3-219ENST00000567805 RAD23BP54727 409 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 SLC8A3P57103 927 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 YWHAEP62258 255 aaKnown RBP5.05□□□□□ -1.6
CLK3-219ENST00000567805 GOLGA8FQ08AF8 430 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 DMWDQ09019 674 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 GOLGA8DPQ0D2H9 430 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 DHCR24Q15392 516 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 GAB4Q2WGN9 574 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 PREPLQ4J6C6 727 aaPredicted RBP5.05□□□□□ -1.6
CLK3-219ENST00000567805 CBWD6Q4V339 395 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 ZNF394Q53GI3 561 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 CBWD3Q5JTY5 395 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 CBWD5Q5RIA9 395 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 PPP1R26Q5T8A7 1209 aaPredicted RBP5.05□□□□□ -1.6
CLK3-219ENST00000567805 LAIR1Q6GTX8 287 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 PKN3Q6P5Z2 889 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 KLHDC10Q6PID8 442 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 SYT13Q7L8C5 426 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 GPRIN1Q7Z2K8 1008 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 CCDC186Q7Z3E2 898 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 TADA2BQ86TJ2 420 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 WDR5BQ86VZ2 330 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 KIAA2013Q8IYS2 634 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 ADGRG2Q8IZP9 1017 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 ZNF276Q8N554 614 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 CAMKK1Q8N5S9 505 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 SLC4A11Q8NBS3 891 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 RPLP0P6Q8NHW5 317 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 SLC35C1Q96A29 364 aa5.05□□□□□ -1.6
CLK3-219ENST00000567805 ACDQ96AP0 544 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms